RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TIMP2P16035 220 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 TBXA2RP21731 343 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 RECQLP46063 649 aaPredicted RBP13.1□□□□□ -0.31
APOB-202ENST00000399256 RFX3P48380 749 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 EPHB3P54753 998 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 CAMK2DQ13557 499 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 RTL4Q6ZR62 310 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 SIAH3Q8IW03 269 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 AMER3Q8N944 861 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 OR8K5Q8NH50 307 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 TRMT10AQ8TBZ6 339 aaKnown RBP13.1□□□□□ -0.31
APOB-202ENST00000399256 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 NXPE2Q96DL1 559 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 C12orf66Q96MD2 445 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 C1QTNF6Q9BXI9 259 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 KLHL1Q9NR64 748 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
APOB-202ENST00000399256 GPR55Q9Y2T6 319 aaPredicted RBP13.1□□□□□ -0.31
APOB-202ENST00000399256 NRG2O14511 850 aaPredicted RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 GPR171O14626 319 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 GRM6O15303 877 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 PRKRAO75569 313 aaKnown RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 OLFM2O95897 454 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 IGHA1P01876 353 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 GAAP10253 952 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 FUT5Q11128 374 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 MPP7Q5T2T1 576 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 FAAH2Q6GMR7 532 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 ARL9Q6T311 187 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 FAM83HQ6ZRV2 1179 aaPredicted RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 RASSF6Q6ZTQ3 369 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 SORCS1Q8WY21 1168 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 CACNG6Q9BXT2 260 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 OR2AG1Q9H205 316 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 KCNN2Q9H2S1 579 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 H2AFY2Q9P0M6 372 aaPredicted RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 TMEM5Q9Y2B1 443 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 EXOGQ9Y2C4 368 aaKnown RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 GLOD5A6NK44 160 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 TRIM77I1YAP6 450 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 SELPP16109 830 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 MAPK9P45984 424 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 ACSM1Q08AH1 577 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 SUZ12Q15022 739 aaKnown RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 ZSWIM7Q19AV6 140 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 SFXN4Q6P4A7 337 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 KCTD20Q7Z5Y7 419 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 CPOQ8IVL8 374 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 CPXM2Q8N436 756 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 ZNF689Q96CS4 500 aaPredicted RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 RBCK1Q9BYM8 510 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 B3GNT4Q9C0J1 378 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 DLL4Q9NR61 685 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 MRPL17Q9NRX2 175 aaKnown RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 CHST2Q9Y4C5 530 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
APOB-202ENST00000399256 PLXNA2O75051 1894 aa13.09□□□□□ -0.31
APOB-202ENST00000399256 SLC9B1P1A6NJY1 282 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 FZD7O75084 574 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 MT-ND4P03905 459 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 CTRB1P17538 263 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 NPR2P20594 1047 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 IFNGR2P38484 337 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 RAB14P61106 215 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 DGCR2P98153 550 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 PUDPQ08623 228 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 LASP1Q14847 261 aaKnown RBP13.08□□□□□ -0.31
APOB-202ENST00000399256 GPNMBQ14956 572 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 SLC25A35Q3KQZ1 300 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 CTRB2Q6GPI1 263 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 BHLHB9Q6PI77 547 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 GPALPP1Q8IXQ4 340 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 MRPL9Q9BYD2 267 aaKnown RBP13.08□□□□□ -0.31
APOB-202ENST00000399256 MED20Q9H944 212 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 LHX9Q9NQ69 397 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 HINT3Q9NQE9 182 aaKnown RBP13.08□□□□□ -0.31
APOB-202ENST00000399256 SPG21Q9NZD8 308 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 TAC3Q9UHF0 121 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 INSL5Q9Y5Q6 135 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 KCNE3Q9Y6H6 103 aa13.08□□□□□ -0.31
APOB-202ENST00000399256 PPM1DO15297 605 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 PQBP1O60828 265 aaKnown RBP13.08□□□□□ -0.32
APOB-202ENST00000399256 ELFN1P0C7U0 828 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 RRASP10301 218 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 NAGAP17050 411 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 HTR1FP30939 366 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 OMPP47874 163 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms