RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TMEM104Q8NE00 496 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 CAPSLQ8WWF8 208 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 SMG7Q92540 1137 aaKnown RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 RAD51AP1Q96B01 352 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 PTCD3Q96EY7 689 aaKnown RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 ZFYVE19Q96K21 471 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 CXorf58Q96LI9 332 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 CMKLR1Q99788 373 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 LRRC2Q9BYS8 371 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 GANQ9H2C0 597 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 DHX33Q9H6R0 707 aaKnown RBP6.19□□□□□ -1.42
SMCO1-201ENST00000397537 IL17RBQ9NRM6 502 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 NPAP1Q9NZP6 1156 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 SLC17A7Q9P2U7 560 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 LHX3Q9UBR4 397 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 PSMD13Q9UNM6 376 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 NOX1Q9Y5S8 564 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 WNT6Q9Y6F9 365 aa6.19□□□□□ -1.42
SMCO1-201ENST00000397537 A0A096LPK6 155 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SMCO3A2RU48 225 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 NPEPPSL1A6NEC2 478 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 B8ZZF3 427 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 E9PQ18 207 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TOR1AO14656 332 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 EGFP01133 1207 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 EPOP01588 193 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TSPAN8P19075 237 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 IFNA8P32881 189 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TPTEP56180 551 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SLAMF1Q13291 335 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 MADCAM1Q13477 382 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 PEX6Q13608 980 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 FASTKD3Q14CZ7 662 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 ZCWPW2Q504Y3 356 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 LGSNQ5TDP6 509 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 MFSD14CQ5VZR4 134 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 LRRC55Q6ZSA7 311 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 Q6ZWC4 215 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 Q7L0L9 218 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 LIMS2Q7Z4I7 341 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CD163Q86VB7 1156 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 KIRREL3Q8IZU9 778 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 BEST3Q8N1M1 668 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 C17orf78Q8N4C9 275 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SPEM1Q8N4L4 309 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 THAP8Q8NA92 274 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CHDHQ8NE62 594 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SDR9C7Q8NEX9 313 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 OR9G4Q8NGQ1 327 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 HTR3CQ8WXA8 447 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 AMDHD1Q96NU7 426 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CCM2Q9BSQ5 444 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 FUNDC2Q9BWH2 189 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TSSK1BQ9BXA7 367 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 POLE4Q9NR33 117 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 PSMC3IPQ9P2W1 217 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 KCNE5Q9UJ90 142 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 PYCARDQ9ULZ3 195 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 GSTK1Q9Y2Q3 226 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TMED3Q9Y3Q3 217 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 LRRC42Q9Y546 428 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 KPTNQ9Y664 436 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 COL11A2P13942 1736 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CENPFP49454 3210 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 UMODL1Q5DID0 1318 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 MON2Q7Z3U7 1717 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 MTMR11A4FU01 709 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 ZNF99A8MXY4 864 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CENPBD1B2RD01 187 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 ANKRD65E5RJM6 399 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 NPIPA3F8WFD2 350 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SGK494L7N484 410 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CLIC1O00299 241 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CHEK1O14757 476 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 STX7O15400 261 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 RNMTO43148 476 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 LATO43561 262 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 GATCO43716 136 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 STX10O60499 249 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SCGNO76038 276 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SEMA3DO95025 777 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 ITGB2P05107 769 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 ADRB1P08588 477 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 CTSAP10619 480 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 ENO3P13929 434 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 DARSP14868 501 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TNNI1P19237 187 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 MAOAP21397 527 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 APOBEC1P41238 236 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 EXOSC7Q15024 291 aaKnown RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TSC22D1Q15714 1073 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 B3GNTL1Q67FW5 361 aaPredicted RBP6.18□□□□□ -1.42
SMCO1-201ENST00000397537 DENND2CQ68D51 928 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 HIST2H2AA3Q6FI13 130 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SLC8B1Q6J4K2 584 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 TMEM71Q6P5X7 295 aa6.18□□□□□ -1.42
SMCO1-201ENST00000397537 SLC35D2Q76EJ3 337 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms