RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 WLSQ5T9L3 541 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 BICRALQ6AI39 1079 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 C3P1Q6ZMU1 363 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 SLC44A2Q8IWA5 706 aaPredicted RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 NEIL3Q8TAT5 605 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 DTNBP1Q96EV8 351 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 SLC35A4Q96G79 324 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 NODALQ96S42 347 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 OSBPL11Q9BXB4 747 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 DCLRE1BQ9H816 532 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 ACSS1Q9NUB1 689 aaPredicted RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 COQ3Q9NZJ6 369 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 ACAD8Q9UKU7 415 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 EIF3LQ9Y262 564 aaKnown RBP13.32□□□□□ -0.28
SEC13-208ENST00000397109 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
SEC13-208ENST00000397109 LOC100653049A0A140TA62 436 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 PRAMEF25A6NGN4 478 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 BBIP1A8MTZ0 92 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 PRSS44E7EML9 344 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 TSPAN2O60636 221 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 ICOSLGO75144 302 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 KRT34O76011 436 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 PSMG1O95456 288 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 COL8A1P27658 744 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 GPC1P35052 558 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 FRKP42685 505 aaPredicted RBP13.31□□□□□ -0.28
SEC13-208ENST00000397109 MANFP55145 182 aaKnown RBP13.31□□□□□ -0.28
SEC13-208ENST00000397109 EMC4Q5J8M3 183 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 IL23RQ5VWK5 629 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 PGM2L1Q6PCE3 622 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 NPSR1Q6W5P4 371 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
SEC13-208ENST00000397109 NATD1Q8N6N6 113 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 OR1J4Q8NGS1 313 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 CLHC1Q8NHS4 586 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 ADOQ96SZ5 270 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 CHST11Q9NPF2 352 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 AIG1Q9NVV5 245 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 KLRF1Q9NZS2 232 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 ATP6V1HQ9UI12 483 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 MRTO4Q9UKD2 239 aaKnown RBP13.31□□□□□ -0.28
SEC13-208ENST00000397109 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 PCDHGB3Q9Y5G1 929 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 HRH3Q9Y5N1 445 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 CACNA1DQ01668 2161 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 UNC79Q9P2D8 2635 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 PHF3Q92576 2039 aaKnown RBP13.31□□□□□ -0.28
SEC13-208ENST00000397109 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 MAST4O15021 2626 aa13.31□□□□□ -0.28
SEC13-208ENST00000397109 CACNA1CQ13936 2221 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 CYSRT1A8MQ03 144 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 SNPHO15079 494 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 ANKRD28O15084 1053 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 WDR1O75083 606 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 TRAPPC6AO75865 159 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 CLDN14O95500 239 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 GABRA1P14867 456 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 ACVR2AP27037 513 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 DCTP40126 519 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 CPA2P48052 419 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 CDK9P50750 372 aaKnown RBP13.3□□□□□ -0.28
SEC13-208ENST00000397109 DIO3P55073 304 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 PSG6Q00889 435 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 HSPB3Q12988 150 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 ZNF385BQ569K4 471 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 COQ5Q5HYK3 327 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 FNDC7Q5VTL7 733 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 SP5Q6BEB4 398 aaPredicted RBP13.3□□□□□ -0.28
SEC13-208ENST00000397109 ANKRD26P1Q6NSI1 321 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 ANGPTL8Q6UXH0 198 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 HACD2Q6Y1H2 254 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 PGAM4Q8N0Y7 254 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 OR5M9Q8NGP3 310 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 CIDECQ96AQ7 238 aaPredicted RBP13.3□□□□□ -0.28
SEC13-208ENST00000397109 GNRHR2Q96P88 292 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 PRPF18Q99633 342 aaKnown RBP13.3□□□□□ -0.28
SEC13-208ENST00000397109 THTPAQ9BU02 230 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 C1orf50Q9BV19 199 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 UBQLN3Q9H347 655 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 DENND2DQ9H6A0 471 aaPredicted RBP13.3□□□□□ -0.28
SEC13-208ENST00000397109 C3orf14Q9HBI5 128 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 Q9N2J8 555 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 PNPLA3Q9NST1 481 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 ATAD3AQ9NVI7 634 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 GPR45Q9Y5Y3 372 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 NCKAP5O14513 1909 aa13.3□□□□□ -0.28
SEC13-208ENST00000397109 GNB5O14775 395 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SCAMP2O15127 329 aaKnown RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 NME6O75414 186 aaPredicted RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 HPNP05981 417 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 SNRPB2P08579 225 aaKnown RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 G6PDP11413 515 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 HTR1EP28566 365 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 PTPN6P29350 595 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 PTGDSP41222 190 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 TRPC1P48995 793 aa13.29□□□□□ -0.28
SEC13-208ENST00000397109 PSMD4P55036 377 aaKnown RBP13.29□□□□□ -0.28
SEC13-208ENST00000397109 PTGR1Q14914 329 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms