RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 GPAT3Q53EU6 434 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 LINC00483Q53H64 154 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 KCTD11Q693B1 232 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SLC25A34Q6PIV7 304 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 MSANTD1Q6ZTZ1 278 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RANBP3LQ86VV4 465 aaPredicted RBP1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ZNF709Q8N972 641 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 OR2A12Q8NGT7 310 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 OR9A1PQ8NGU1 263 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 OR2L8Q8NGY9 312 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RAB39BQ96DA2 213 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RNF185Q96GF1 192 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TMEM80Q96HE8 168 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 KAT8Q9H7Z6 458 aaKnown RBP1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TMEM206Q9H813 350 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 STARD5Q9NSY2 213 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 DNAJC17Q9NVM6 304 aaKnown RBP1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ERVK-18Q9QC07 812 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SPRR3Q9UBC9 169 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CFDP1Q9UEE9 299 aaPredicted RBP1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 PRPF19Q9UMS4 504 aaKnown RBP1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ERVW-1Q9UQF0 538 aa1.12□□□□□ -2.23
RNU6-1040P-201ENST00000383974 OTOGLQ3ZCN5 2332 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ITGB4P16144 1822 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 IGHV3-64DA0A0J9YX35 117 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SMIM28A0A1B0GU29 152 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 C13orf42A0A1B0GVH6 325 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 A8MUA0 341 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 NPIPA2E9PIF3 369 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 PES1O00541 588 aaKnown RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 KLF8O95600 359 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 IGKV1D-16P01601 117 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 GSTA1P08263 222 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 IGFBP1P08833 259 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 IFNAR1P17181 557 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 FCARP24071 287 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ADORA2BP29275 332 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 NTSP30990 170 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 STARP49675 285 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CLPPQ16740 277 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 DNAJC21Q5F1R6 531 aaKnown RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 PAGE3Q5JUK9 113 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ARSKQ6UWY0 536 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 C17orf82Q86X59 251 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SKA3Q8IX90 412 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TUSC5Q8IXB3 177 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 P3H4Q92791 437 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 FAM210BQ96KR6 192 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ZNF641Q96N77 438 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 BAG1Q99933 345 aaPredicted RBP1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 NLNQ9BYT8 704 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ZDHHC11Q9H8X9 412 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RNPEPL1Q9HAU8 725 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SH2D2AQ9NP31 389 aa1.11□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SCN2AQ99250 2005 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 GJE1A6NN92 205 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 C19orf81C9J6K1 198 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ZNF264O43296 627 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 AIREO43918 545 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 EFNA2O43921 213 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 DKC1O60832 514 aaKnown RBP eCLIP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 APOA4P06727 396 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RETP07949 1114 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SERPINF2P08697 491 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ADRB3P13945 408 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RPL29P47914 159 aaKnown RBP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SGSHP51688 502 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ST8SIA6P61647 398 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 PLOD1Q02809 727 aaPredicted RBP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CHRFAM7AQ494W8 412 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 KRTAP13-2Q52LG2 175 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CCDC158Q5M9N0 1113 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SHQ1Q6PI26 577 aaKnown RBP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 GLRX5Q86SX6 157 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 MMAAQ8IVH4 418 aaKnown RBP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 PEX5LQ8IYB4 626 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TMEM252Q8N6L7 170 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TEKT1Q969V4 418 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CCDC114Q96M63 670 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 FANCFQ9NPI8 374 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 DCAF13Q9NV06 445 aaKnown RBP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RBAKQ9NYW8 714 aaPredicted RBP1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 MBD2Q9UBB5 411 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 NARFQ9UHQ1 456 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 FZR1Q9UM11 496 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TP53TG5Q9Y2B4 290 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CLCA3PQ9Y6N3 262 aa1.1□□□□□ -2.23
RNU6-1040P-201ENST00000383974 IGLV2-18A0A075B6J9 118 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 A0A0A6YYC8 382 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 H7C0S8 307 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 I3L1I5 382 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 ARPC1BO15143 372 aaKnown RBP1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 RAMP1O60894 148 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 AKR7A3O95154 331 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SLC25A27O95847 323 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 SFTPBP07988 381 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 CCNA2P20248 432 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 HPDP32754 393 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 TFPI2P48307 235 aa1.09□□□□□ -2.23
RNU6-1040P-201ENST00000383974 NPY2RP49146 381 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms