RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PSD4Q8NDX1 1056 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ACOT11Q8WXI4 607 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ADOQ96SZ5 270 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 SH3D21A4FU49 640 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 PRAMEF10O60809 474 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 FAM69BQ5VUD6 431 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 TMCO6Q96DC7 493 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 DDX31Q9H8H2 851 aaKnown RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 TLCD2A6NGC4 264 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 TRAPPC6AO75865 159 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 MNDAP41218 407 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 SCN1BQ07699 218 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 ATG14Q6ZNE5 492 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 HDDC2Q7Z4H3 204 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 YIPF7Q8N8F6 280 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 CHDHQ8NE62 594 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 TMEM239Q8WW34 195 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 TRPV5Q9NQA5 729 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 FGF21Q9NSA1 209 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 PPP4R1LQ9P1A2 415 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 GNG8Q9UK08 70 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 COL9A1P20849 921 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 MAGEA8P43361 318 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 TMEM184AQ6ZMB5 413 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 BTBD2Q9BX70 525 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 LHPPQ9H008 270 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 MCUBQ9NWR8 336 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 ANXA2P2A6NMY6 339 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 ZNF670-ZNF695F2Z2N8 137 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 PLOD2O00469 737 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 LCKP06239 509 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 ANXA2P07355 339 aaKnown RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 NAA10P41227 235 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 LEXMQ3ZCV2 418 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 OR2AJ1Q8NGZ0 328 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 GPER1Q99527 375 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 USP36Q9P275 1121 aaKnown RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 PLOD3O60568 738 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 KCNJ10P78508 379 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 NHSL2Q5HYW2 709 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 PLBD1Q6P4A8 553 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 RABEPKQ7Z6M1 372 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 ACBD7Q8N6N7 88 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 TRUB1Q8WWH5 349 aaKnown RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 SRA1Q9HD15 236 aaKnown RBP13.6□□□□□ -0.23
TCOF1-202ENST00000377797 DAPP1Q9UN19 280 aa13.6□□□□□ -0.23
TCOF1-202ENST00000377797 FAM227AF5H4B4 570 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 PPM1DO15297 605 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 KHDRBS3O75525 346 aaKnown RBP13.59□□□□□ -0.23
TCOF1-202ENST00000377797 TRIM23P36406 574 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 HSD11B2P80365 405 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 C14orf28Q4W4Y0 310 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SPATC1Q76KD6 591 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ATCAYQ86WG3 371 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ASCC3Q8N3C0 2202 aaKnown RBP13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ST6GAL1P15907 406 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ENTPD1P49961 510 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ENTPD8Q5MY95 495 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 TMEM92Q6UXU6 159 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 IL22RA1Q8N6P7 574 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 OR4K13Q8NH42 304 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 A0A1W2PRG6 482 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SNPHO15079 494 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 BSGP35613 385 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-202ENST00000377797 DAPP51397 102 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 GFOD2Q3B7J2 385 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 OMA1Q96E52 524 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 RBP7Q96R05 134 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 NCDNQ9UBB6 729 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ZNF443Q9Y2A4 671 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SLC35F4A4IF30 521 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SLC22A31A6NKX4 558 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 YY2O15391 372 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SYT13Q7L8C5 426 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SHFQ7M4L6 423 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 GPAT4Q86UL3 456 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SPARTQ8N0X7 666 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 OR52E2Q8NGJ4 325 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 OR6N2Q8NGY6 317 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SLC22A8Q8TCC7 542 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 DIO2Q92813 273 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 ZFP3Q96NJ6 502 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 BARD1Q99728 777 aaKnown RBP13.59□□□□□ -0.23
TCOF1-202ENST00000377797 PLEKHA1Q9HB21 404 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 NDUFAF4Q9P032 175 aa13.59□□□□□ -0.23
TCOF1-202ENST00000377797 TRBV4-1A0A0J9YWV2 114 aa13.58□□□□□ -0.23
TCOF1-202ENST00000377797 CDC14CA4D256 554 aa13.58□□□□□ -0.23
TCOF1-202ENST00000377797 PAPLNO95428 1278 aa13.58□□□□□ -0.23
TCOF1-202ENST00000377797 ITGAMP11215 1152 aa13.58□□□□□ -0.23
TCOF1-202ENST00000377797 PRPH2P23942 346 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms