RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 PZPP20742 1482 aa4.42□□□□□ -1.7
SCN1A-202ENST00000375405 TRABD2BA6NFA1 517 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ICMTO60725 284 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CHRNB2P17787 502 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 OXTRP30559 389 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MTNR1BP49286 362 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PRKXP51817 358 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 TAS2R43P59537 309 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ARHGAP1Q07960 439 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 KIAA0141Q14154 515 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 RFTN1Q14699 578 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PRRT3Q5FWE3 981 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 FBXO48Q5FWF7 155 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 DHRS7BQ6IAN0 325 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 FRMPD2BQ6IN97 320 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CATSPERGQ6ZRH7 1159 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 DCBLD1Q8N8Z6 715 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 RELL2Q8NC24 303 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 OR4L1Q8NH43 312 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 IL31RAQ8NI17 732 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PSMF1Q92530 271 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CDC6Q99741 560 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 OCSTAMPQ9BR26 566 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 AMBRA1Q9C0C7 1298 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 POLR2J2Q9GZM3 115 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MAGEH1Q9H213 219 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ANKRA2Q9H9E1 313 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 TECRQ9NZ01 308 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 RALYQ9UKM9 306 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PLAGL1Q9UM63 463 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SLC35A3Q9Y2D2 325 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 LRIT2A6NDA9 550 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 RCCD1A6NED2 376 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MROH6A6NGR9 719 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 RGS13O14921 159 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ERI3O43414 337 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ADAM23O75077 832 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ADAM11O75078 769 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ST6GAL1P15907 406 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CHATP28329 748 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 NR2C2P49116 596 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 HINT1P49773 126 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 TNFAIP6P98066 277 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 AUHQ13825 339 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SNAI3Q3KNW1 292 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 C19orf54Q5BKX5 351 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CARM1Q86X55 608 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 KDF1Q8NAX2 398 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 RNF128Q8TEB7 428 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 KCNE4Q8WWG9 221 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PIGCQ92535 297 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MOB3AQ96BX8 217 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 DMRTA2Q96SC8 542 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 TWSG1Q9GZX9 223 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 UBQLN4Q9NRR5 601 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 FAM120CQ9NX05 1096 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 IL36AQ9UHA7 158 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 INSL6Q9Y581 213 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 DNMT1P26358 1616 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MYH8P13535 1937 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PTPRTO14522 1441 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MAP1BP46821 2468 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 LAMC1P11047 1609 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CDRT1O95170 752 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CLDN9O95484 217 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PTPN2P17706 415 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PSMB4P28070 264 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 LAP3P28838 519 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CCR3P51677 355 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ADARB1P78563 741 aaKnown RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SIM1P81133 766 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 OGDHQ02218 1023 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PLCXD2Q0VAA5 305 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 FAAP100Q0VG06 881 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 CMPK2Q5EBM0 449 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ARSIQ5FYB1 569 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 KLHDC7AQ5VTJ3 777 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 BEST3Q8N1M1 668 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 OR5AK3PQ8NH89 298 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SENP8Q96LD8 212 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 GPR174Q9BXC1 333 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 GPRC5CQ9NQ84 441 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ASF1BQ9NVP2 202 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 AIG1Q9NVV5 245 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 UTS2RQ9UKP6 389 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 AMDHD2Q9Y303 409 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 ATG2BQ96BY7 2078 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 WTIPA6NIX2 430 aaPredicted RBP4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SYT5O00445 386 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SLC22A3O75751 556 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 PTHP01270 115 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 OR5AL1P0C617 328 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 EDNRBP24530 442 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 MPSTP25325 297 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SSTR4P31391 388 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 SULT1A1P50225 295 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 GRB10Q13322 594 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 TUBA3CQ13748 450 aa4.41□□□□□ -1.7
SCN1A-202ENST00000375405 KCNJ11Q14654 390 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms