RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MXRA5Q9NR99 2828 aa18.97■□□□□ 0.63
CD47-202ENST00000361309 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.96■□□□□ 0.63
CD47-202ENST00000361309 KLF4O43474 513 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 COQ9O75208 318 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 SERPINB9P50453 376 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 RPS3AP61247 264 aaKnown RBP18.96■□□□□ 0.63
CD47-202ENST00000361309 ACSM2AQ08AH3 577 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 CYP27C1Q4G0S4 372 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 SPIN4Q56A73 249 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 BEX5Q5H9J7 111 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 TEX35Q5T0J7 233 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 ACSM2BQ68CK6 577 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 CXXC5Q7LFL8 322 aaKnown RBP18.96■□□□□ 0.63
CD47-202ENST00000361309 METTL25Q8N6Q8 603 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 DUSP19Q8WTR2 217 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 FUT8Q9BYC5 575 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 DMGDHQ9UI17 866 aaKnown RBP18.96■□□□□ 0.63
CD47-202ENST00000361309 AP4B1Q9Y6B7 739 aa18.96■□□□□ 0.63
CD47-202ENST00000361309 ANK3Q12955 4377 aaKnown RBP18.95■□□□□ 0.62
CD47-202ENST00000361309 ULK1O75385 1050 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 SUPT7LO94864 414 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 PAX1P15863 534 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 HMOX2P30519 316 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 TIA1P31483 386 aaKnown RBP eCLIP18.95■□□□□ 0.622e-6■■■■□ 24.8
CD47-202ENST00000361309 HTR6P50406 440 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 SGCBQ16585 318 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 PRSS53Q2L4Q9 553 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 UNC50Q53HI1 259 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 PPP4R4Q6NUP7 873 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 MARCH3Q86UD3 253 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 METTL6Q8TCB7 284 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 TMEM171Q8WVE6 324 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 GFM2Q969S9 779 aaKnown RBP18.95■□□□□ 0.62
CD47-202ENST00000361309 FAM120CQ9NX05 1096 aaKnown RBP18.95■□□□□ 0.62
CD47-202ENST00000361309 CR1P17927 2039 aa18.95■□□□□ 0.62
CD47-202ENST00000361309 FREM1Q5H8C1 2179 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 SHISA8B8ZZ34 492 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 TRIM49D1C9J1S8 452 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 PLAUP00749 431 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 JUNP05412 331 aaKnown RBP18.94■□□□□ 0.62
CD47-202ENST00000361309 FCGR2AP12318 317 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 CASQ1P31415 396 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 SLC6A8P48029 635 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 OCRLQ01968 901 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 BTKQ06187 659 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 DECR1Q16698 335 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 GLYR1Q49A26 553 aaPredicted RBP18.94■□□□□ 0.62
CD47-202ENST00000361309 ZNF678Q5SXM1 525 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 LGSNQ5TDP6 509 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 TMEM107Q6UX40 140 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 ZNF704Q6ZNC4 412 aaPredicted RBP18.94■□□□□ 0.62
CD47-202ENST00000361309 SH2D5Q6ZV89 423 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 GPRIN3Q6ZVF9 776 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 GGNQ86UU5 652 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 SPATA3Q8NHX4 192 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 ZNF382Q96SR6 550 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 PRRG4Q9BZD6 226 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 CDC42EP4Q9H3Q1 356 aaKnown RBP18.94■□□□□ 0.62
CD47-202ENST00000361309 CXorf56Q9H5V9 222 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 PLSCR4Q9NRQ2 329 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 ZNF701Q9NV72 531 aaPredicted RBP18.94■□□□□ 0.62
CD47-202ENST00000361309 CLEC4AQ9UMR7 237 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 NFU1Q9UMS0 254 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 C19orf53Q9UNZ5 99 aaPredicted RBP18.94■□□□□ 0.62
CD47-202ENST00000361309 EMC9Q9Y3B6 208 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 STAB1Q9NY15 2570 aa18.94■□□□□ 0.62
CD47-202ENST00000361309 ABCA1O95477 2261 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 A0A087WV62 115 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 UQCRHLA0A096LP55 91 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 MYO1GB0I1T2 1018 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 POC1B-GALNT4F8VUJ3 575 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 GMFGO60234 142 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 ANXA4P09525 319 aaPredicted RBP18.93■□□□□ 0.62
CD47-202ENST00000361309 PPP3CBP16298 524 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 RFX3P48380 749 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 CLK3P49761 638 aaKnown RBP18.93■□□□□ 0.62
CD47-202ENST00000361309 NCBP2P52298 156 aaKnown RBP eCLIP18.93■□□□□ 0.62
CD47-202ENST00000361309 STAC2Q6ZMT1 411 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 ZNF572Q7Z3I7 529 aaPredicted RBP18.93■□□□□ 0.62
CD47-202ENST00000361309 RELL1Q8IUW5 271 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 OR6K3Q8NGY3 331 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 DCAKDQ8WVC6 231 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 C11orf24Q96F05 449 aaPredicted RBP18.93■□□□□ 0.62
CD47-202ENST00000361309 TMEM237Q96Q45 408 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 Q9N2J8 555 aa18.93■□□□□ 0.62
CD47-202ENST00000361309 UPK1AO00322 258 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 EIF1AYO14602 144 aaKnown RBP18.92■□□□□ 0.62
CD47-202ENST00000361309 IL33O95760 270 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 NID1P14543 1247 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 DDCP20711 480 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 EIF1AXP47813 144 aaKnown RBP18.92■□□□□ 0.62
CD47-202ENST00000361309 ATP5J2P56134 94 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 C2orf80Q0P641 193 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 CAPRIN1Q14444 709 aaKnown RBP18.92■□□□□ 0.62
CD47-202ENST00000361309 C8orf74Q6P047 294 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 GALNT18Q6P9A2 607 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 CDC26Q8NHZ8 85 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 PLPPR2Q96GM1 343 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 REPIN1Q9BWE0 567 aaKnown RBP18.92■□□□□ 0.62
CD47-202ENST00000361309 SHCBP1LQ9BZQ2 653 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms