RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ASGR2P07307 311 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 PPP1R8Q12972 351 aaKnown RBP18.4■□□□□ 0.54
HDAC4-201ENST00000345617 LAPTM4AQ15012 233 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 DAZAP1Q96EP5 407 aaKnown RBP18.4■□□□□ 0.54
HDAC4-201ENST00000345617 PITX2Q99697 317 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 NICN1Q9BSH3 213 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 B3GNT2Q9NY97 397 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SLC22A7Q9Y694 548 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 CCNOP22674 350 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 TBCEQ15813 527 aaPredicted RBP18.4■□□□□ 0.54
HDAC4-201ENST00000345617 DCAF4L2Q8NA75 395 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 OR5D14Q8NGL3 314 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SLCO5A1Q9H2Y9 848 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 RAB3AP20336 220 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 UPP1Q16831 310 aa18.4■□□□□ 0.54
HDAC4-201ENST00000345617 SDHDO14521 159 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 GABRA5P31644 462 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 SERINC5Q86VE9 423 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 LIX1LQ8IVB5 337 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 B3GNT7Q8NFL0 401 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 OR5L2Q8NGL0 311 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 PAQR8Q8TEZ7 354 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 ADAMTS14Q8WXS8 1223 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 SIGLEC10Q96LC7 697 aa18.39■□□□□ 0.54
HDAC4-201ENST00000345617 ADAM12O43184 909 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 MPC1LP0DKB6 136 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 LMO2P25791 158 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 BTN1A1Q13410 526 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 MYADMQ96S97 322 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 RDH14Q9HBH5 336 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 CLDN24A6NM45 220 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 ABHD5Q8WTS1 349 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 RAB7BQ96AH8 199 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 VNN1O95497 513 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 SERPINA7P05543 415 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 MMP2P08253 660 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 CDK4P11802 303 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 SPATC1Q76KD6 591 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 CELF5Q8N6W0 485 aaKnown RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 C16orf78Q8WTQ4 265 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 EMC7Q9NPA0 242 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 A6NIZ1 184 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 KCNK2O95069 426 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 METTL15P1P0C7V9 234 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 HTR3AP46098 478 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 RAP1BP61224 184 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 RAP1AP62834 184 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 ARHGAP19Q14CB8 494 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF679Q8IYX0 411 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 RPL10LQ96L21 214 aaKnown RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 MS4A4EQ96PG1 132 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 N4BP2Q86UW6 1770 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF8P17098 575 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 MFGE8Q08431 387 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 PLA2G7Q13093 441 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 GCDHQ92947 438 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 HIPK2Q9H2X6 1198 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 VEZF1Q14119 521 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 CFAP77Q6ZQR2 320 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 IL17RCQ8NAC3 791 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 TXNDC15Q96J42 360 aa18.39■□□□□ 0.53
HDAC4-201ENST00000345617 WDR77Q9BQA1 342 aaPredicted RBP18.39■□□□□ 0.53
HDAC4-201ENST00000345617 DAP3P51398 398 aaKnown RBP18.38■□□□□ 0.53
HDAC4-201ENST00000345617 ARSIQ5FYB1 569 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 ESAMQ96AP7 390 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SORCS2Q96PQ0 1159 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 IL26Q9NPH9 171 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SLC6A14Q9UN76 642 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 GPR25O00155 361 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 TO15178 435 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 KDELC1Q6UW63 502 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 FBXL18Q96ME1 805 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 RFXAPO00287 272 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 PRPH2P23942 346 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SLC22A8Q8TCC7 542 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 H7C1Q1 480 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 CLDN7O95471 211 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 MS4A13Q5J8X5 152 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 UHRF1Q96T88 793 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-201ENST00000345617 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
HDAC4-201ENST00000345617 IGLV3-22A0A075B6J6 115 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SOX3P41225 446 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 OR5K4A6NMS3 321 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 PPP1R2P9O14990 202 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 FANCGO15287 622 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 TGOLN2O43493 480 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SDC3O75056 442 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SNCGO76070 127 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 CRABP1P29762 137 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 OC90Q02509 493 aaPredicted RBP18.38■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF425Q6IV72 752 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 RNF19AQ9NV58 838 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 C1orf123Q9NWV4 160 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 RIPK3Q9Y572 518 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 MAGEB1P43366 347 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 DIO3P55073 304 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 CES4AQ5XG92 561 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms