RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TMEM201Q5SNT2 666 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PRAMEF20Q5VT98 475 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SFTPA1Q8IWL2 248 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 MROQ9BYG7 248 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 UBQLN4Q9NRR5 601 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PAIP2BQ9ULR5 123 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 ICE1Q9Y2F5 2266 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 AIFM1O95831 613 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 RETP07949 1114 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 POU3F2P20265 443 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 GAS6Q14393 721 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 STK11Q15831 433 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 SPATC1Q76KD6 591 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 FTMTQ8N4E7 242 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 MFRPQ9BY79 579 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 CXorf21Q9HAI6 301 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 GPN1Q9HCN4 374 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 FKBP7Q9Y680 259 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 HTR3EA5X5Y0 456 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 INMTO95050 263 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 OPN1LWP04000 364 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 GSTT2BP0CG30 244 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 SSR4P51571 173 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 PRPS1P60891 318 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 VRK3Q8IV63 474 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 ZNF101Q8IZC7 436 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 P2RY12Q9H244 342 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 NT5DC2Q9H857 520 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 CACNA1BQ00975 2339 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 GADD45AP24522 165 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 MAGEA8P43361 318 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 CAPZA1P52907 286 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 TSPAN5P62079 268 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 TLE3Q04726 772 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 MXD1Q05195 221 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 IDNKQ5T6J7 187 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 CPZQ66K79 652 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 ZNF740Q8NDX6 193 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 C15orf40Q8WUR7 153 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 NUP205Q92621 2012 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 PHYHO14832 338 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 ERCC1P07992 297 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 ITGA5P08648 1049 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 RORCP51449 518 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 GFERP55789 205 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 CCL7P80098 99 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 TOR3AQ9H497 397 aa15.41■□□□□ 0.06
SMARCA4-201ENST00000344626 H0YC42 278 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CLUP10909 449 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 GABRB3P28472 473 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 EXOSC7Q15024 291 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 OR5B2Q96R09 309 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 TCEAL2Q9H3H9 227 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CAMK2AQ9UQM7 478 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 ENPP4Q9Y6X5 453 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 NBASA2RRP1 2371 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 ARNTLO00327 626 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 GALR3O60755 368 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 EEF1A1P5Q5VTE0 462 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CLIP4Q8N3C7 705 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CCDC54Q8NEL0 328 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 OR2T4Q8NH00 348 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CDS1Q92903 461 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 IP6K3Q96PC2 410 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 MS4A8Q9BY19 250 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 AGPAT4Q9NRZ5 378 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 EMCNQ9ULC0 261 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 ENTPD6O75354 484 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 RLN1P04808 185 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 FESP07332 822 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CHRNB1P11230 501 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 F8A1P23610 371 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 IL12AP29459 219 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 ACVR1Q04771 509 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 EXT1Q16394 746 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 GUSBP11Q6P575 273 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 B3GNT4Q9C0J1 378 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 PALMDQ9NP74 551 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 PRDM9Q9NQV7 894 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 SOCS2O14508 198 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 CISD3P0C7P0 127 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 TMEM150AQ86TG1 271 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 SIRT6Q8N6T7 355 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 RAB2BQ8WUD1 216 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 ASB12Q8WXK4 309 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 THOC3Q96J01 351 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 LMF2Q9BU23 707 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 LRRC61Q9BV99 259 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 ABCB9Q9NP78 766 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 SESN1Q9Y6P5 492 aa15.4■□□□□ 0.06
SMARCA4-201ENST00000344626 METTL21EPA6NDL7 271 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC22A31A6NKX4 558 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 CDK4P11802 303 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC3A1Q07837 685 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 TECPR1Q7Z6L1 1165 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 SERPINA11Q86U17 422 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 ERI1Q8IV48 349 aaKnown RBP15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 SNRNP27Q8WVK2 155 aaKnown RBP15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 CCDC74BQ96LY2 380 aa15.39■□□□□ 0.06
SMARCA4-201ENST00000344626 ANKRA2Q9H9E1 313 aa15.39■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms