RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 NXPE1Q8N323 547 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 OR4K1Q8NGD4 311 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 RNASE11Q8TAA1 199 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 MYLIPQ8WY64 445 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 SLC25A46Q96AG3 418 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 KIAA1143Q96AT1 154 aaPredicted RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 MED8Q96G25 268 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 C14orf144Q96I85 54 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 BBS4Q96RK4 519 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 NEU1Q99519 415 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 MCOLN1Q9GZU1 580 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 PPP1R3EQ9H7J1 279 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 DDX31Q9H8H2 851 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 PCDHB7Q9Y5E2 793 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 IRAK3Q9Y616 596 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 E9PI62 339 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 G3V3Q6 166 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 ETHE1O95571 254 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 PRPS2P11908 318 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 CD22P20273 847 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 AOAHP28039 575 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 CD79BP40259 229 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 SPIBQ01892 262 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 GK2Q14410 553 aaPredicted RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 COX20Q5RI15 118 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 LHX8Q68G74 356 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 WASH2PQ6VEQ5 465 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 SERPINA11Q86U17 422 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 LSRQ86X29 649 aaPredicted RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 CHST14Q8NCH0 376 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 FBXO22Q8NEZ5 403 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 OR5AK3PQ8NH89 298 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 CNOT9Q92600 299 aaKnown RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 HDHD2Q9H0R4 259 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 GAREM1Q9H706 876 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 NT5DC2Q9H857 520 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 ANKRA2Q9H9E1 313 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 AP1M2Q9Y6Q5 423 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 SAP18O00422 153 aaKnown RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 SUV39H1O43463 412 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 CXCL2P19875 107 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 RORAP35398 523 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 INO80DQ53TQ3 878 aaPredicted RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 CD276Q5ZPR3 534 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 FRG2Q64ET8 278 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 TSEN54Q7Z6J9 526 aaKnown RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 PDZD3Q86UT5 571 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 BMPERQ8N8U9 685 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 BPIFCQ8NFQ6 507 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 C7orf34Q96L11 122 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 FRG2BQ96QU4 278 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 TAPBPLQ9BX59 468 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 CHIAQ9BZP6 476 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 METTL17Q9H7H0 456 aaPredicted RBP11.85□□□□□ -0.51
DFFB-202ENST00000339350 SCP2D1Q9UJQ7 156 aa11.85□□□□□ -0.51
DFFB-202ENST00000339350 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 FAM221BA6H8Z2 402 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 A8MVJ9 347 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 SCN2BO60939 215 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 ETFAP13804 333 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 TIMP2P16035 220 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 SPAM1P38567 509 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 CRYBB2P43320 205 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 ITGA1P56199 1179 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 IRF8Q02556 426 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 XKR6Q5GH73 641 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
DFFB-202ENST00000339350 PDZD9Q8IXQ8 264 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 B3GNT7Q8NFL0 401 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 CMTM7Q96FZ5 175 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 PITX2Q99697 317 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 OPN3Q9H1Y3 402 aaPredicted RBP11.84□□□□□ -0.51
DFFB-202ENST00000339350 SUV39H2Q9H5I1 410 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
DFFB-202ENST00000339350 BEX1Q9HBH7 125 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 MS4A12Q9NXJ0 267 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
DFFB-202ENST00000339350 KCNE1BA0A087WTH5 132 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 L7N2F9 121 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 SPI1P17947 270 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 PSMA1P25786 263 aaKnown RBP11.84□□□□□ -0.51
DFFB-202ENST00000339350 SLC6A1P30531 599 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 VIPR1P32241 457 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
DFFB-202ENST00000339350 TLE2Q04725 743 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 CCSMST1Q4G0I0 132 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 THEM4Q5T1C6 240 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 IER5LQ5T953 404 aa11.84□□□□□ -0.51
DFFB-202ENST00000339350 FAHD1Q6P587 224 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms