RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TTC9BQ8N6N2 239 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 OR2L2Q8NH16 312 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 FANK1Q8TC84 345 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 UPRTQ96BW1 309 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 TIFAQ96CG3 184 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 HAVCR1Q96D42 359 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 TMEM168Q9H0V1 697 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 RGCCQ9H4X1 137 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 MED20Q9H944 212 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 IL17CQ9P0M4 197 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF225Q9UK10 706 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 GMEB2Q9UKD1 530 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 SCML2Q9UQR0 700 aa12.51□□□□□ -0.41
COL2A1-201ENST00000337299 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 NEDD8-MDP1E9PL57 170 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 PGAM2P15259 253 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SLC1A3P43003 542 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 NKPD1Q17RQ9 610 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 METAP1DQ6UB28 335 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 RAB11FIP2Q7L804 512 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SVBPQ8N300 66 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 DUSP19Q8WTR2 217 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 TCTEX1D2Q8WW35 142 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 ADAMTS14Q8WXS8 1223 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SEC22AQ96IW7 307 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 ADAD1Q96M93 576 aaKnown RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SLC6A7Q99884 636 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SYT4Q9H2B2 425 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 TSPAN6O43657 245 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 FADS1O60427 444 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF254O75437 659 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 OAZ2O95190 189 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 RCBTB2O95199 551 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 GJB5O95377 273 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 BPIP17213 487 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 NDUFV2P19404 249 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 BMP8BP34820 402 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 TAS2R43P59537 309 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 DYRK1AQ13627 763 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 CD276Q5ZPR3 534 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 VASNQ6EMK4 673 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 BMP8AQ7Z5Y6 402 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SYT9Q86SS6 491 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 RBM45Q8IUH3 476 aaKnown RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 RDH10Q8IZV5 341 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 C3orf49Q96BT1 292 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 RADILQ96JH8 1075 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SUV39H2Q9H5I1 410 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 PLCXD1Q9NUJ7 323 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 TRAV18A0A075B6X5 111 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 LCMT2O60294 686 aaKnown RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SOX30O94993 753 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 CBSLP0DN79 551 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 APEHP13798 732 aaKnown RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 CBSP35520 551 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 PSMB10P40306 273 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 MAGEA11P43364 429 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 HYAL2Q12891 473 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 SLC14A2Q15849 920 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 UBXN11Q5T124 520 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 CYHR1Q6ZMK1 362 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 KIAA1958Q8N8K9 716 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 ECHDC3Q96DC8 303 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 C11orf84Q9BUA3 381 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-201ENST00000337299 RNF186Q9NXI6 227 aa12.5□□□□□ -0.41
COL2A1-201ENST00000337299 GPX2P18283 190 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CD9P21926 228 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 SOX18P35713 384 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 DLSTP36957 453 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 DEFA6Q01524 100 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ABI3BPQ7Z7G0 1075 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 NANOGP1Q8N7R0 232 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 SMPDL3AQ92484 453 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CNTNAP3BQ96NU0 1288 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CDCA4Q9BXL8 241 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF700Q9H0M5 742 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CST11Q9H112 138 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 B4GALT6Q9UBX8 382 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 MED31Q9Y3C7 131 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 LRRC72A6NJI9 287 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ACP2P11117 423 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 MAP3K8P41279 467 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 PNLIPRP1P54315 467 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 FABP5Q01469 135 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 SSX1Q16384 188 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 FAM46CQ5VWP2 391 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 PARGQ86W56 976 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms