RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
KATNA1-201ENST00000335643 CACNA1DQ01668 2161 aa13.57□□□□□ -0.24
KATNA1-201ENST00000335643 A0A0G2JNJ9 132 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 NKX2-6A6NCS4 301 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 WDR1O75083 606 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 UTS2O95399 124 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 SNRPB2P08579 225 aaKnown RBP13.56□□□□□ -0.24
KATNA1-201ENST00000335643 TCEA1P23193 301 aaKnown RBP13.56□□□□□ -0.24
KATNA1-201ENST00000335643 RPL3P39023 403 aaKnown RBP13.56□□□□□ -0.24
KATNA1-201ENST00000335643 HBA1P69905 142 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 STX5Q13190 355 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 LASP1Q14847 261 aaKnown RBP13.56□□□□□ -0.24
KATNA1-201ENST00000335643 GRAMD1BQ3KR37 738 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 AGBL2Q5U5Z8 902 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 FIGNL1Q6PIW4 674 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 MAVSQ7Z434 540 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 MARCH3Q86UD3 253 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 LIX1LQ8IVB5 337 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 EID3Q8N140 333 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 CEP70Q8NHQ1 597 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 CA5BP1Q8WTZ4 195 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 OR5P2Q8WZ92 322 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 WDYHV1Q96HA8 205 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 BHLHE41Q9C0J9 482 aaPredicted RBP13.56□□□□□ -0.24
KATNA1-201ENST00000335643 PRDM14Q9GZV8 571 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 C3orf14Q9HBI5 128 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 THAP1Q9NVV9 213 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 GPATCH2Q9NW75 528 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 Q9UFV3 132 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 KCNE3Q9Y6H6 103 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
KATNA1-201ENST00000335643 PDZD2O15018 2839 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 GOLGA8QA0A0J9YX86 632 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 GOLGA8OA6NCC3 632 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 GOLGA8NF8WBI6 632 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 SCN2BO60939 215 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 KCNK2O95069 426 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 EPHA3P29320 983 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 GFRA1P56159 465 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 TFF3Q07654 80 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 PGS1Q32NB8 556 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 ACSF3Q4G176 576 aaPredicted RBP13.55□□□□□ -0.24
KATNA1-201ENST00000335643 TMEM211Q6ICI0 200 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 PLXDC2Q6UX71 529 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 WDR75Q8IWA0 830 aaKnown RBP13.55□□□□□ -0.24
KATNA1-201ENST00000335643 FADS6Q8N9I5 356 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 NAXEQ8NCW5 288 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 OR4C3Q8NH37 302 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 OR14L1PQ8NHC6 308 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 FAM110BQ8TC76 370 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 CDS1Q92903 461 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 ABTB1Q969K4 478 aaPredicted RBP13.55□□□□□ -0.24
KATNA1-201ENST00000335643 KLHDC3Q9BQ90 382 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 SERHL2Q9H4I8 314 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 ATAD3AQ9NVI7 634 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 NKIRAS1Q9NYS0 192 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 COQ3Q9NZJ6 369 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 MED11Q9P086 117 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
KATNA1-201ENST00000335643 FAM90A27PA6NNH2 459 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 C9JVG2 144 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 ZIC3O60481 467 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 KCNH1O95259 989 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 C1QCP02747 245 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 H2AFXP16104 143 aaPredicted RBP13.54□□□□□ -0.24
KATNA1-201ENST00000335643 LBPP18428 481 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 SRD5A2P31213 254 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 CCT3P49368 545 aaKnown RBP13.54□□□□□ -0.24
KATNA1-201ENST00000335643 STARP49675 285 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 NME5P56597 212 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 B3GALT5-AS1P59052 145 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 PRR5P85299 388 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 TP53BP2Q13625 1128 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 OR2M3Q8NG83 312 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 JADE3Q92613 823 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 DSN1Q9H410 356 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 FAM120CQ9NX05 1096 aaKnown RBP13.54□□□□□ -0.24
KATNA1-201ENST00000335643 TAS2R10Q9NYW0 307 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 PPP4R1LQ9P1A2 415 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 ABCG2Q9UNQ0 655 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 CAMK2AQ9UQM7 478 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 RPH3AQ9Y2J0 694 aaPredicted RBP13.54□□□□□ -0.24
KATNA1-201ENST00000335643 NOTCH2Q04721 2471 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 ZNF195O14628 629 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 HDAC3O15379 428 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 GMFGO60234 142 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 OXSR1O95747 527 aaPredicted RBP13.54□□□□□ -0.24
KATNA1-201ENST00000335643 ALOX5P09917 674 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 GABRA1P14867 456 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 IL12AP29459 219 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 CHRNB4P30926 498 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 RPS26P62854 115 aaKnown RBP13.54□□□□□ -0.24
KATNA1-201ENST00000335643 VPS26BQ4G0F5 336 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 SLC9B1Q4ZJI4 515 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 OGFOD2Q6N063 350 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 ACAD11Q709F0 780 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 ANKRD46Q86W74 232 aa13.54□□□□□ -0.24
KATNA1-201ENST00000335643 TRIM42Q8IWZ5 723 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms