RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PAN3Q58A45 887 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SPANXN4Q5MJ08 99 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OR13F1Q8NGS4 319 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ENPP4Q9Y6X5 453 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PIAS1O75925 651 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MMP3P08254 477 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 C1GALT1C1LP0DN25 315 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 UBL4AP11441 157 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MPEG1Q2M385 716 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MS4A13Q5J8X5 152 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SBSNQ6UWP8 590 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CACUL1Q86Y37 369 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MS4A4EQ96PG1 132 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 NMUR1Q9HB89 426 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 DEC1Q9P2X7 70 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PCDHB10Q9UN67 800 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CAMK2AQ9UQM7 478 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 A0A087WZY1 265 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 C9J4A7 227 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ANKRD28O15084 1053 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 KDELR3O43731 214 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CACNG3O60359 315 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF254O75437 659 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 C6orf47O95873 294 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MT-CYBP00156 380 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PCCBP05166 539 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 STSP08842 583 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CX3CR1P49238 355 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF92Q03936 586 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PRKCZQ05513 592 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 APOBEC3HQ6NTF7 200 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PDZD3Q86UT5 571 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PARGQ86W56 976 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CLRN3Q8NCR9 226 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 LYSMD1Q96S90 227 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SCPEP1Q9HB40 452 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SDR39U1Q9NRG7 319 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TP53TG5Q9Y2B4 290 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 BCL9O00512 1426 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM233B4DJY2 109 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 K7EPK0 472 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ARNTLO00327 626 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 NUMBP49757 651 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 DUSP28Q4G0W2 176 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ENTHD1Q8IYW4 607 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 FAM58AQ8N1B3 248 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 FAM71E2Q8N5Q1 922 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 LINC00116Q8NCU8 138 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 GPR150Q8NGU9 434 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 RBMXL1Q96E39 390 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 NAA11Q9BSU3 229 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SMPD4Q9NXE4 827 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF586Q9NXT0 402 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 EXO1Q9UQ84 846 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 A8MX80 341 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 F6UZH7 168 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 NUDT21O43809 227 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 STK17BO94768 372 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SOX18P35713 384 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SLC17A1Q14916 467 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ECM1Q16610 540 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SOHLH1Q5JUK2 328 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 EXOSC6Q5RKV6 272 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 AGTRAPQ6RW13 159 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 FAM111BQ6SJ93 734 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PCED1BQ96HM7 432 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CDKN2AIPNLQ96HQ2 116 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CHRDL1Q9BU40 450 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 DPEP3Q9H4B8 488 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 RDH14Q9HBH5 336 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 RYDENQ9NUL5 291 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 M0R2N6 131 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MT-ND4LP03901 98 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 GABRB3P28472 473 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 GHRHRQ02643 423 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CPZQ66K79 652 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 BRICD5Q6PL45 260 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 IL34Q6ZMJ4 242 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 FBXO15Q8NCQ5 510 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OR5D16Q8NGK9 328 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ACER1Q8TDN7 264 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SPRYD4Q8WW59 207 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 RANGRFQ9HD47 186 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ELOVL2Q9NXB9 296 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 LAP3P28838 519 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 LCN6P62502 163 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 APOFQ13790 326 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 B3GNT8Q7Z7M8 397 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SLC29A1Q99808 456 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CARS2Q9HA77 564 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TDP1Q9NUW8 608 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SLC2A6Q9UGQ3 507 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 YTHDF2Q9Y5A9 579 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 A0A1W2PQ09 198 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM82A0PJX8 343 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MTMR11A4FU01 709 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CD300LBA8K4G0 201 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ALDOAP04075 364 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 KDELR2P33947 212 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms