RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZNF564Q8TBZ8 553 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR10C1Q96KK4 312 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 RBM12Q9NTZ6 932 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 KRBA1A5PL33 1030 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CD8B2A6NJW9 211 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 F5H5P2 479 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ENTPD5O75356 428 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ORM1P02763 201 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 TK1P04183 234 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CTSAP10619 480 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 BCKDHAP12694 445 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF28P17035 718 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 BCKDHBP21953 392 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 MASP1P48740 699 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 MFSD13AQ14CX5 517 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR2B11Q5JQS5 317 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PPM1JQ5JR12 505 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF440Q8IYI8 595 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR5B3Q8NH48 314 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC47A1Q96FL8 570 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CPNE1Q99829 537 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SRMSQ9H3Y6 488 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CACFD1Q9UGQ2 172 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ASB3Q9Y575 518 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SCN11AQ9UI33 1791 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 GNSP15586 552 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 AKR1C3P42330 323 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 RCAN1P53805 252 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM205BPQ63HN1 556 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ADGRF4Q8IZF3 695 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 EID2Q8N6I1 236 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 KCTD12Q96CX2 325 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 LYSMD1Q96S90 227 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ALG8Q9BVK2 526 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 LIN28AQ9H9Z2 209 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CPQQ9Y646 472 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 U3KQV3 271 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 RGS11O94810 467 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CD82P27701 267 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 LAP3P28838 519 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 NDST2P52849 883 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 DGKZQ13574 1117 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR7A5Q15622 319 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 MPPED2Q15777 294 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 TP53I3Q53FA7 332 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 DAZAP1Q96EP5 407 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 AKR1E2Q96JD6 320 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ANAPC13Q9BS18 74 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PLK3Q9H4B4 646 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PLSCR4Q9NRQ2 329 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 EML6Q6ZMW3 1958 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 IQGAP1P46940 1657 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CRYM-AS1A6NIL9 109 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR4C45A6NMZ5 311 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SEMA4FO95754 770 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF17P17021 662 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRPS1L1P21108 318 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 LEPRP48357 1165 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SUCLG1P53597 346 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 FOXM1Q08050 763 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SPATA31D4Q6ZUB0 917 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CDC20BQ86Y33 519 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PDSS2Q86YH6 399 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 C1orf216Q8TAB5 229 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SYT3Q9BQG1 590 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZSWIM1Q9BR11 485 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CPPED1Q9BRF8 314 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 EBF3Q9H4W6 596 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 MBNL1Q9NR56 388 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZDHHC8Q9ULC8 765 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ABCA1O95477 2261 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A1B0GUH1 482 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 GPR137BO60478 399 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 PIAS2O75928 621 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CRYAAP02489 173 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ALDH2P05091 517 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CYP2A6P11509 494 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 NME2P22392 152 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SSTR2P30874 369 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC6A9P48067 706 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 ERVS71-1P61550 626 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM156Q8N614 296 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 UPRTQ96BW1 309 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 CDT1Q9H211 546 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 HMX1Q9NP08 348 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 COL20A1Q9P218 1284 aa5.78□□□□□ -1.48
CDC42BPA-201ENST00000334218 D6RAR5 112 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 H3BMQ9 156 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 ADAMTS3O15072 1205 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 SCN2BO60939 215 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 IL12BP29460 328 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 TTPAP49638 278 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 BCAMP50895 628 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 NDUFA8P51970 172 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 SNRPFP62306 86 aaKnown RBP5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARHGAP8P85298 464 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 MEF2DQ14814 521 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 FAM26DQ5JW98 314 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 SFRP5Q5T4F7 317 aa5.77□□□□□ -1.48
CDC42BPA-201ENST00000334218 RALGPS2Q86X27 583 aaPredicted RBP5.77□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms