RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NDOR1Q9UHB4 597 aa18.88■□□□□ 0.61
RIPPLY3-201ENST00000329553 SEC16AO15027 2179 aa18.88■□□□□ 0.61
RIPPLY3-201ENST00000329553 A0A1W2PQM1 296 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 MAP3K8P41279 467 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 GCGRP47871 477 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 SMN1Q16637 294 aaKnown RBP18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 PROX2Q3B8N5 592 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 CCNJQ5T5M9 372 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 ZCCHC12Q6PEW1 402 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 SLCO6A1Q86UG4 719 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 GALNT12Q8IXK2 581 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 TMCO5AQ8N6Q1 288 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 ZNF540Q8NDQ6 660 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 PHF10Q8WUB8 498 aaKnown RBP18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 PIK3R3Q92569 461 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 RIT1Q92963 219 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 SIGLEC11Q96RL6 698 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 RHNO1Q9BSD3 238 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 HMG20AQ9NP66 347 aa18.87■□□□□ 0.61
RIPPLY3-201ENST00000329553 RGS10O43665 173 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 CCL7P80098 99 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 NPRL3Q12980 569 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 SQSTM1Q13501 440 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 TRIM61Q5EBN2 209 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 COLEC12Q5KU26 742 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 TYW3Q6IPR3 259 aaKnown RBP18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 PRSS48Q7RTY5 328 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 P2RY8Q86VZ1 359 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 SVOPQ8N4V2 548 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 OR9Q2Q8NGE9 314 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 OR6T1Q8NGN1 323 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 NDNFQ8TB73 568 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 ALPK1Q96QP1 1244 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 WDR12Q9GZL7 423 aaKnown RBP18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 MTHFD2LQ9H903 347 aaPredicted RBP18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 ACOT13Q9NPJ3 140 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 DUSP22Q9NRW4 184 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 SERTAD3Q9UJW9 196 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 SLC9A8Q9Y2E8 581 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 WDR45Q9Y484 360 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 CHST2Q9Y4C5 530 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 NCOR1O75376 2440 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 BOLA2-SMG1P6H3BVE0 249 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 HRKO00198 91 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 YKT6O15498 198 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 MSL3P1P0C860 447 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 HOXD12P35452 270 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 KRT20P35900 424 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 BCAP31P51572 246 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 HSD17B7P56937 341 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 RPP38P78345 283 aaKnown RBP18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 BTLAQ7Z6A9 289 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 GPR135Q8IZ08 494 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 OR52P1PQ8NH57 321 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 ZNF501Q96CX3 271 aaPredicted RBP18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 STACQ99469 402 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 YIPF2Q9BWQ6 316 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 FGF21Q9NSA1 209 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 ACAD8Q9UKU7 415 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 A4GNTQ9UNA3 340 aa18.86■□□□□ 0.61
RIPPLY3-201ENST00000329553 WBP4O75554 376 aaKnown RBP18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 ANXA8P13928 327 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 CNR2P34972 360 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 ST13P50502 369 aaKnown RBP18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 PIN1Q13526 163 aaPredicted RBP18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 CEP76Q8TAP6 659 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 GPR151Q8TDV0 419 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 IPCEF1Q8WWN9 437 aaPredicted RBP18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 MVB12AQ96EY5 273 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 DHRS1Q96LJ7 313 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 FAM210AQ96ND0 272 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 DGAT2Q96PD7 388 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 NIPSNAP1Q9BPW8 284 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 GABARAPL3Q9BY60 117 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 FBXO34Q9NWN3 711 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 SLC6A14Q9UN76 642 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 HCN4Q9Y3Q4 1203 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 TRBV4-1A0A0J9YWV2 114 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 CCNB2O95067 398 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 IMPDH2P12268 514 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 SSTR4P31391 388 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 GABRA3P34903 492 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 LPAL2Q16609 132 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 APH1BQ8WW43 257 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 S100ZQ8WXG8 99 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 HRASLS5Q96KN8 279 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 NDC1Q9BTX1 674 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 LANCL2Q9NS86 450 aa18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 GPR55Q9Y2T6 319 aaPredicted RBP18.85■□□□□ 0.61
RIPPLY3-201ENST00000329553 M0R3G1 203 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 SYT5O00445 386 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 TOX3O15405 576 aaPredicted RBP18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 FAM20BO75063 409 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 FADS2O95864 444 aaKnown RBP18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 RPLP0P05388 317 aaKnown RBP18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 DGUOKQ16854 277 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 DCST2Q5T1A1 773 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 CCDC81Q6ZN84 652 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 TAGAPQ8N103 731 aa18.84■□□□□ 0.61
RIPPLY3-201ENST00000329553 CLIP4Q8N3C7 705 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms