RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 OR10G6Q8NH81 332 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ZCCHC10Q8TBK6 192 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 KAT2AQ92830 837 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ARSGQ96EG1 525 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 TEX101Q9BY14 249 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 KIAA1549LQ6ZVL6 1849 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 LINC00862A6NCI5 91 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 BTN3A3O00478 584 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 TPPPO94811 219 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 CRISP1P54107 249 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 CLDN20P56880 219 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PCBP3P57721 371 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 REEP5Q00765 189 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ZNF628Q5EBL2 1059 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 CRB2Q5IJ48 1285 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 GDPGP1Q6ZNW5 385 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC37A3Q8NCC5 494 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ZNF680Q8NEM1 530 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 PPP1R3EQ9H7J1 279 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 ELF5Q9UKW6 265 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 KCNE3Q9Y6H6 103 aa14.59□□□□□ -0.07
SHROOM1-201ENST00000319854 LYRM1O43325 122 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ERVK-21P61565 698 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ID2Q02363 134 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 DDI2Q5TDH0 399 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 TEX261Q6UWH6 196 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 IKBIPQ70UQ0 350 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 NANOGP1Q8N7R0 232 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 BMPERQ8N8U9 685 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 C19orf18Q8NEA5 215 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 NEURL3Q96EH8 262 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 KATNB1Q9BVA0 655 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 RACGAP1Q9H0H5 632 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC6A20Q9NP91 592 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ICKQ9UPZ9 632 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 U3KQ87 197 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 SYNDIG1LA6NDD5 238 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF860A6NHJ4 632 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 HPGDSO60760 199 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 C5AR1P21730 350 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF542PQ5EBM4 170 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 TMEM196Q5HYL7 178 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 TCTN3Q6NUS6 607 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ANKRD54Q6NXT1 300 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 CNIH2Q6PI25 160 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 KIAA1324Q6UXG2 1013 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 OR52P1PQ8NH57 321 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 MARVELD3Q96A59 401 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ZG16BQ96DA0 208 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 MTERF3Q96E29 417 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC35G5Q96KT7 338 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 RHBGQ9H310 441 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 MVB12BQ9H7P6 319 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 CAPN10Q9HC96 672 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 TBC1D29Q9UFV1 150 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 ACSL5Q9ULC5 683 aa14.58□□□□□ -0.08
SHROOM1-201ENST00000319854 A0A1W2PR48 441 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 AKAP8O43823 692 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 RPS21P63220 83 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 DBPQ10586 325 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC9A5Q14940 896 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 LTB4RQ15722 352 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 SFTPA2Q8IWL1 248 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 ACOT4Q8N9L9 421 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 OR11H4Q8NGC9 324 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 DNAJA4Q8WW22 397 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 NELL2Q99435 816 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 MARVELD1Q9BSK0 173 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 C6orf106Q9H6K1 298 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 PELI2Q9HAT8 420 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 SLC35C2Q9NQQ7 365 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 K7EQS6 105 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 IL1AP01583 271 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 HMGN2P05204 90 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 GLULP15104 373 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 RHCEP18577 417 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 COL9A1P20849 921 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 BTN3A2P78410 334 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 TRIQKQ629K1 86 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 ZNF776Q68DI1 518 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 LCN9Q8WX39 176 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 KLHL6Q8WZ60 621 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 AMDHD1Q96NU7 426 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 TM9SF2Q99805 663 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 BTBD1Q9H0C5 482 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 WASH6PQ9NQA3 447 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 SCML1Q9UN30 329 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 LGI1O95970 557 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 ICAM2P13598 275 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 HOXB2P14652 356 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 MRPL28Q13084 256 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 ARHGAP19Q14CB8 494 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 NUDT18Q6ZVK8 323 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 GALNT11Q8NCW6 608 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 ZC3HAV1LQ96H79 300 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 GPR137Q96N19 417 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 AUP1Q9Y679 476 aa14.57□□□□□ -0.08
SHROOM1-201ENST00000319854 CFAP54Q96N23 3096 aa14.56□□□□□ -0.08
SHROOM1-201ENST00000319854 TRIM3O75382 744 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms