RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FCRLBQ6BAA4 426 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 C1orf94Q6P1W5 598 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 PLBD1Q6P4A8 553 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 VASH1Q7L8A9 365 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 COMMD7Q86VX2 200 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 NLGN4YQ8NFZ3 816 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 NTMT1Q9BV86 223 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 SLC12A9Q9BXP2 914 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 SH3BGRL2Q9UJC5 107 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 HYKKA2RU49 373 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 GRXCR2A6NFK2 248 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 TRIM3O75382 744 aaPredicted RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 AHSA1O95433 338 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 ADAP00813 363 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 CTHP32929 405 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 ADH7P40394 386 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 WNT4P56705 351 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 NEIL2Q969S2 332 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 UTRNP46939 3433 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 HHLA1C9JL84 531 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 GRPRP30550 384 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 TRAM2Q15035 370 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 XKR7Q5GH72 579 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 FAM69BQ5VUD6 431 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 PEG10Q86TG7 708 aaKnown RBP12.68□□□□□ -0.38
HPS3-201ENST00000296051 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 SYNPOQ8N3V7 929 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 C16orf78Q8WTQ4 265 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 EPYCQ99645 322 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 CRB3Q9BUF7 120 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 GALNT9Q9HCQ5 603 aa12.68□□□□□ -0.38
HPS3-201ENST00000296051 OR14I1A6ND48 311 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 FLRT2O43155 660 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 CYB5AP00167 134 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 GP1BBP13224 206 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ITGB7P26010 798 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 CEBPGP53567 150 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ACY1Q03154 408 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 MPP7Q5T2T1 576 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ABHD17BQ5VST6 288 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ZCCHC12Q6PEW1 402 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ZNF627Q7L945 461 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.67□□□□□ -0.38
HPS3-201ENST00000296051 DUS3LQ96G46 650 aaKnown RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 TRMT2BQ96GJ1 504 aaKnown RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 DUSP21Q9H596 190 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 NHSL1Q5SYE7 1610 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 SOX1O00570 391 aaPredicted RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 CER1O95813 267 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 F8A1P23610 371 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 COX20Q5RI15 118 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 WDR53Q7Z5U6 358 aaPredicted RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 FOXRED2Q8IWF2 684 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 TEX26Q8N6G2 289 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 OR4F15Q8NGB8 312 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 OR52P1PQ8NH57 321 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 HRASLS5Q96KN8 279 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ZSWIM3Q96MP5 696 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 SAP130Q9H0E3 1048 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 AKIP1Q9NQ31 210 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 STOX2Q9P2F5 926 aaPredicted RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 LTBP4Q8N2S1 1624 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 TRBV4-1A0A0J9YWV2 114 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ADAM8P78325 824 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 FAM26DQ5JW98 314 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ZNF767PQ75MW2 155 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 CPOQ8IVL8 374 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ACBD7Q8N6N7 88 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 CKLFQ9UBR5 152 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 PCDHGA6Q9Y5G7 932 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 LRRN3E7EW58 273 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 MT-ND5P03915 603 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 IGFBP1P08833 259 aaPredicted RBP12.67□□□□□ -0.38
HPS3-201ENST00000296051 CTBSQ01459 385 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 DMWDQ09019 674 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 KDM4DQ6B0I6 523 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 RTL10Q7L3V2 364 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 CPXM2Q8N436 756 aa12.67□□□□□ -0.38
HPS3-201ENST00000296051 COQ10AQ96MF6 247 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms