RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TACSTD2P09758 323 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 CTSAP10619 480 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 BMP1P13497 986 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ADRB3P13945 408 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 LIPAP38571 399 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 TIAL1Q01085 375 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ELAVL3Q14576 367 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 MEDAGQ5VYS4 303 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC35B4Q969S0 331 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 RBM18Q96H35 190 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 QRSL1Q9H0R6 528 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 RBM38Q9H0Z9 239 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 A0A0G2JMP0 313 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 H3BNC9 293 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 TOR1AO14656 332 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 CDC123O75794 336 aaPredicted RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 GP2P55259 537 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 CTBP2P56545 445 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 MINDY4Q4G0A6 757 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 OR4M2Q8NGB6 313 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 TRMT2BQ96GJ1 504 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 TMEM45AQ9NWC5 275 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 FAM155AB1AL88 458 aaPredicted RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 POLR2CP19387 275 aaPredicted RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 CBLP22681 906 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 AQP2P41181 271 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC6A11P48066 632 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 PTH2RP49190 550 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 SIM1P81133 766 aaPredicted RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 NDUFA9Q16795 377 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 GXYLT1Q4G148 440 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 FRMPD2BQ6IN97 320 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ENTHD1Q8IYW4 607 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 THEM6Q8WUY1 208 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 DUS3LQ96G46 650 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 FAM46AQ96IP4 442 aaKnown RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 GFRA2O00451 464 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 C1orf105O95561 183 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 LDOC1O95751 146 aaPredicted RBP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ITGAMP11215 1152 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 ZNF823P16415 610 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 DDX6P26196 483 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 TM4SF4P48230 202 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 TGM4P49221 684 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 RGS6P49758 472 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 RFPL4BQ6ZWI9 263 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 DGLUCYQ7Z3D6 616 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 BTLAQ7Z6A9 289 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC30A8Q8IWU4 369 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 RIMKLAQ8IXN7 391 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 OR5T3Q8NGG3 340 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 OR5M11Q96RB7 305 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 FANCFQ9NPI8 374 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 POLHQ9Y253 713 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
SLC6A1-201ENST00000287766 B3GALT2O43825 422 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 PRKRAO75569 313 aaKnown RBP11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 RCBTB2O95199 551 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 TYRP1P17643 537 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 AQP6Q13520 282 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 B3GLCTQ6Y288 498 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 HORMAD2Q8N7B1 307 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 PROKR2Q8NFJ6 384 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 RAD9AQ99638 391 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 SLC6A7Q99884 636 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 KCNN3Q9UGI6 736 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 GLS2Q9UI32 602 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 EIF3FO00303 357 aaPredicted RBP11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 KLK8O60259 260 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 GATBO75879 557 aaKnown RBP11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 KAT7O95251 611 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 GASTP01350 101 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 TP53P04637 393 aaPredicted RBP11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 CDK1P06493 297 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 CD3GP09693 182 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 ERVFC1P60507 584 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 VAMP2P63027 116 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 GPM6BQ13491 265 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 SETD6Q8TBK2 473 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 FBRSQ9HAH7 460 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 HSFX1Q9UBD0 423 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 ATG2BQ96BY7 2078 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 TRBV4-1A0A0J9YWV2 114 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 K7ESM1 405 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 FAAHO00519 579 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 RNASET2O00584 256 aaKnown RBP11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 GMDSO60547 372 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 CAV3P56539 151 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 MC2RQ01718 297 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 BATFQ16520 125 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 ESCO2Q56NI9 601 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 ZNF542PQ5EBM4 170 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 L3MBTL4Q8NA19 623 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 NUP43Q8NFH3 380 aa11.84□□□□□ -0.51
SLC6A1-201ENST00000287766 CNOT9Q92600 299 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms