RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF764Q96H86 408 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ARHGAP9Q9BRR9 750 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 BEX2Q9BXY8 128 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ABCG8Q9H221 673 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 SPNS1Q9H2V7 528 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 MCUBQ9NWR8 336 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 NFKBIL1Q9UBC1 381 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 TEKT2Q9UIF3 430 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 CBLCQ9ULV8 474 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 PRELID1Q9Y255 219 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ITM2BQ9Y287 266 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 HSPB11Q9Y547 144 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 SPIN1Q9Y657 262 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 SPTBN4Q9H254 2564 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 LAMA1P25391 3075 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 LINC00854A0A1B0GVQ3 168 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1W2PRQ8 180 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 E7EQ34 232 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SGTAO43765 313 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 PDGFAP04085 211 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 FHP07954 510 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 TIMP2P16035 220 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 LHCGRP22888 699 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SLC6A1P30531 599 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 TGM4P49221 684 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 MAPK12P53778 367 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 RAG2P55895 527 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 RPS25P62851 125 aaKnown RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SLC5A12Q1EHB4 618 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF284Q2VY69 593 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 MINDY4Q4G0A6 757 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ATP13A5Q4VNC0 1218 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 MED27Q6P2C8 311 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ASPGQ86U10 573 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 TCEANCQ8N8B7 351 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 TP53I13Q8NBR0 393 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 OR4M2Q8NGB6 313 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 OR52P1PQ8NH57 321 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ASZ1Q8WWH4 475 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 NEURL3Q96EH8 262 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 MTERF1Q99551 399 aaKnown RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 EDEM2Q9BV94 578 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 HDHD5Q9BXW7 423 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SUV39H2Q9H5I1 410 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 B3GAT2Q9NPZ5 323 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 STOX2Q9P2F5 926 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ZFR2Q9UPR6 939 aaKnown RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 PRODHO43272 600 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SNAPC5O75971 98 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 RAF1P04049 648 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 NAT1P18440 290 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 GSTM3P21266 225 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 POU1F1P28069 291 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 UQCRC1P31930 480 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 CHI3L1P36222 383 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 KCNJ5P48544 419 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 EPHA4P54764 986 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 RGS1Q08116 209 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 GANABQ14697 944 aaKnown RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 MPEG1Q2M385 716 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 CD276Q5ZPR3 534 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 TCTN3Q6NUS6 607 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 AGTRAPQ6RW13 159 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 TEX261Q6UWH6 196 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SLCO4C1Q6ZQN7 724 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 UTS2BQ765I0 119 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SLC37A3Q8NCC5 494 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 CDC26Q8NHZ8 85 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 C16orf78Q8WTQ4 265 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 NR4A3Q92570 626 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 RAB7BQ96AH8 199 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 KCTD12Q96CX2 325 aaKnown RBP9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SCMH1Q96GD3 660 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF354BQ96LW1 612 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 SORCS2Q96PQ0 1159 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 OR4K3Q96R72 315 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 U3KQ87 197 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 ADAMTS9Q9P2N4 1935 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 DOCK9Q9BZ29 2069 aa9.68□□□□□ -0.86
UPF3B-201ENST00000276201 GNG14A0A1W2PPG7 69 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 NPIPB15A6NHN6 443 aaPredicted RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 ARHGEF33A8MVX0 844 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CDK2AP1O14519 115 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CHP2O43745 196 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 PCDH8O95206 1070 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 NAGAP17050 411 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 BDKRB1P46663 353 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 CSNK1EP49674 416 aaKnown RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 AFF3P51826 1226 aaKnown RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 DCDC1P59894 354 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 SHC2P98077 582 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 BDH1Q02338 343 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 MXD1Q05195 221 aa9.67□□□□□ -0.86
UPF3B-201ENST00000276201 SUZ12Q15022 739 aaKnown RBP9.67□□□□□ -0.86
UPF3B-201ENST00000276201 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms