RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ZBTB8BQ8NAP8 495 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 RHOXF1Q8NHV9 184 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 NDNFQ8TB73 568 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 GPR151Q8TDV0 419 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 RIT1Q92963 219 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ITPKCQ96DU7 683 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF578Q96N58 590 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF350Q9GZX5 532 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 PRTFDC1Q9NRG1 225 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 PLCXD1Q9NUJ7 323 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 AASSQ9UDR5 926 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 DAPK2Q9UIK4 370 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 BOLA2-SMG1P6H3BVE0 249 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 AP3D1O14617 1153 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 MPZL2O60487 215 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 GIMD1P0DJR0 217 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 OSMP13725 252 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 TAS2R41P59536 307 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ST3GAL3Q11203 375 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 FOXD4Q12950 439 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ILKQ13418 452 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 COL9A2Q14055 689 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 SEC23BQ15437 767 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 HMGN2P46Q86SG4 172 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 SHISA5Q8N114 240 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF619Q8N2I2 560 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 OR6Q1Q8NGQ2 317 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 MAFAQ8NHW3 353 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 SLC38A4Q969I6 547 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 MVB12AQ96EY5 273 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 NEURL2Q9BR09 285 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 DUSP23Q9BVJ7 150 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ALOXE3Q9BYJ1 711 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ANKRD19PQ9H560 264 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 POLE3Q9NRF9 147 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 IMPAD1Q9NX62 359 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 RNF6Q9Y252 685 aa14.26□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF443Q9Y2A4 671 aaPredicted RBP14.26□□□□□ -0.13
SF3B4-201ENST00000271628 AGAP5A6NIR3 686 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 HRO43593 1189 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 ZIC2O95409 532 aaPredicted RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 DBIP07108 87 aaKnown RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 CCNYL3P0C7X3 344 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 CHMP24386 653 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 IFNGR2P38484 337 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 IDH2P48735 452 aaKnown RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 TUBA1BP68363 451 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 POU6F2P78424 691 aaPredicted RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 ZXDAP98168 799 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 TARDBPQ13148 414 aaKnown RBP eCLIP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 EXOSC7Q15024 291 aaKnown RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 ZNHIT3Q15649 155 aaPredicted RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 PMS2CLQ68D20 193 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 PGBD2Q6P3X8 592 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 PODNL1Q6PEZ8 512 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 WDR74Q6RFH5 385 aaPredicted RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 TUBA1AQ71U36 451 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 KMT5CQ86Y97 462 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 OR52R1Q8NGF1 315 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 HOXB13Q92826 284 aaPredicted RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 DGAT2Q96PD7 388 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 ITPAQ9BY32 194 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 SPRTNQ9H040 489 aaPredicted RBP14.25□□□□□ -0.13
SF3B4-201ENST00000271628 ARMC7Q9H6L4 198 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 SEMA5BQ9P283 1151 aa14.25□□□□□ -0.13
SF3B4-201ENST00000271628 ZAR1LA6NP61 321 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 ZNF749O43361 778 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CYP7B1O75881 506 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 OR2B3O76000 313 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 NKX2-2O95096 273 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CBX7O95931 251 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CD36P16671 472 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CD1CP29017 333 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 LSM3P62310 102 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 SERTAD2Q14140 314 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 GPR68Q15743 365 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 INAQ16352 499 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 AMZ1Q400G9 498 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 PRPF38BQ5VTL8 546 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CD300LDQ6UXZ3 194 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 Q6ZPB1 254 aaPredicted RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 AHSA2Q719I0 299 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 BTLAQ7Z6A9 289 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 C7orf57Q8NEG2 295 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 OR51Q1Q8NH59 317 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 APH1BQ8WW43 257 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 MYDGFQ969H8 173 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 UBE2FQ969M7 185 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 PELOQ9BRX2 385 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 RBCK1Q9BYM8 510 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 POLR2J3Q9H1A7 115 aaKnown RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 NLGN3Q9NZ94 848 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 CHST2Q9Y4C5 530 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 COL6A3P12111 3177 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 MN1Q10571 1320 aaPredicted RBP14.24□□□□□ -0.13
SF3B4-201ENST00000271628 GUSBP08236 651 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 MSL3P1P0C860 447 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 PNLIPP16233 465 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 S1PR1P21453 382 aa14.24□□□□□ -0.13
SF3B4-201ENST00000271628 GALNSP34059 522 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms