RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CDCP1Q9H5V8 836 aa8.98□□□□□ -0.97
SNRNP40-201ENST00000263694 ZBTB20Q9HC78 741 aaPredicted RBP8.98□□□□□ -0.97
SNRNP40-201ENST00000263694 MMP25Q9NPA2 562 aa8.98□□□□□ -0.97
SNRNP40-201ENST00000263694 NKX1-2Q9UD57 310 aaPredicted RBP8.98□□□□□ -0.97
SNRNP40-201ENST00000263694 AURKCQ9UQB9 309 aa8.98□□□□□ -0.97
SNRNP40-201ENST00000263694 PCNX3Q9H6A9 2034 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 FRYQ5TBA9 3013 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 DHRS12A0PJE2 317 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ARGFXA6NJG6 315 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 KLK10O43240 276 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 SUV39H1O43463 412 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 FRS3O43559 492 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 MGRN1O60291 552 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 BCAS1O75363 584 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 UGT2B17O75795 530 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 IL33O95760 270 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 EPPINO95925 133 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ALPPP05187 535 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 CYP4B1P13584 511 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ABCD3P28288 659 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 SELENOWP63302 87 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 HPCAP84074 193 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 PLCXD2Q0VAA5 305 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 GNA13Q14344 377 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ARMC8Q8IUR7 673 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF619Q8N2I2 560 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 METTL25Q8N6Q8 603 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 OR5L2Q8NGL0 311 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 OR52P1PQ8NH57 321 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 NUBPLQ8TB37 319 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 KCNE4Q8WWG9 221 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 OMA1Q96E52 524 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 HSPBAP1Q96EW2 488 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 PYURFQ96I23 114 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 THOC3Q96J01 351 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 RNF145Q96MT1 663 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF607Q96SK3 696 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 SAP130Q9H0E3 1048 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 MTHFD2LQ9H903 347 aaPredicted RBP8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 S100A14Q9HCY8 104 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 RLIMQ9NVW2 624 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 CALML5Q9NZT1 146 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 MYOTQ9UBF9 498 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 SEC14L3Q9UDX4 400 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 ANAPC2Q9UJX6 822 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 CHST2Q9Y4C5 530 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 NPFFR2Q9Y5X5 522 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 DSPPQ9NZW4 1301 aa8.97□□□□□ -0.97
SNRNP40-201ENST00000263694 IGF2RP11717 2491 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 A6NL46 340 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 TTC36A6NLP5 189 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 C17orf51A8MQB3 221 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 hCG_2039718K7EN88 272 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 TO15178 435 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 KIAA0513O60268 411 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 TSPAN2O60636 221 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ICOSLGO75144 302 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 UGT2B11O75310 529 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ITGA10O75578 1167 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 TIPRLO75663 272 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 AK1P00568 194 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 PABPC4LP0CB38 370 aaKnown RBP8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ETS2P15036 469 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ATP6V1C1P21283 382 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 FBXW4P57775 412 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 KCNJ10P78508 379 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 RAPSNQ13702 412 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 RCN1Q15293 331 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 GRAMD1BQ3KR37 738 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF311Q5JNZ3 666 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 TBCELQ5QJ74 424 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 DCAF10Q5QP82 559 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 PDZK1Q5T2W1 519 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 PRAMEF8Q5VWM4 474 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 PRAMEF7Q5VXH5 474 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 LYPD8Q6UX82 237 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 APOOLQ6UXV4 268 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF836Q6ZNA1 936 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 FKBP9P1Q75LS8 142 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 RBM45Q8IUH3 476 aaKnown RBP8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 LACC1Q8IV20 430 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 KBTBD2Q8IY47 623 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 SLC34A3Q8N130 599 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 CLIP4Q8N3C7 705 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 ZNF614Q8N883 585 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 OR52E4Q8NGH9 312 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 OR4D11Q8NGI4 311 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 OR8K3Q8NH51 312 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 VANGL1Q8TAA9 524 aaPredicted RBP8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 BRIX1Q8TDN6 353 aaKnown RBP8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 PSMF1Q92530 271 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 DIO2Q92813 273 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 STMN2Q93045 179 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 TP53INP1Q96A56 240 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 NACC2Q96BF6 587 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 SLC47A1Q96FL8 570 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 DOHHQ9BU89 302 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 PRR14Q9BWN1 585 aa8.96□□□□□ -0.97
SNRNP40-201ENST00000263694 FAM117AQ9C073 453 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms