RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SLC22A23A1A5C7 686 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 C6orf47O95873 294 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 SCGB1D2O95969 90 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 IFNA2P01563 188 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 OR12D2P58182 307 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
VAMP4-201ENST00000236192 TGM3Q08188 693 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 CLINT1Q14677 625 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 XKR4Q5GH76 650 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 UNQ6126/PRO20091Q6UXV3 157 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 OR52E4Q8NGH9 312 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 RGMAQ96B86 450 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 SLC6A16Q9GZN6 736 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 SCML1Q9UN30 329 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 ATG4BQ9Y4P1 393 aa12.19□□□□□ -0.46
VAMP4-201ENST00000236192 RNF13O43567 381 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RCBTB2O95199 551 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 DNASE1L1P49184 302 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 HSPB3Q12988 150 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 Q5BKY6 102 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF551Q7Z340 670 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RANBP3LQ86VV4 465 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 OR2T33Q8NG76 320 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 CAPN10Q9HC96 672 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 POLLQ9UGP5 575 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 USP21Q9UK80 565 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 DMRT1Q9Y5R6 373 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 MPTX1A8MV57 137 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 SLC31A2O15432 143 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 LGI1O95970 557 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 FGF7P21781 194 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 P2RY14Q15391 338 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 LBHQ53QV2 105 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 C9orf57Q5W0N0 161 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 FIGNL1Q6PIW4 674 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 FAM196AQ6ZSG2 479 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 TMPRSS11BQ86T26 416 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 COMTD1Q86VU5 262 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 SERPINA9Q86WD7 417 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 MAL2Q969L2 176 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 MRGPRX2Q96LB1 330 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RBP7Q96R05 134 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 NIFKQ9BYG3 293 aaKnown RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 NLGN3Q9NZ94 848 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 GHRLQ9UBU3 117 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 GPR52Q9Y2T5 361 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 NRCAMQ92823 1304 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 A0A1B0GV90 55 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 AMY2AP04746 511 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 IRF1P10914 325 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 PRDX3P30048 256 aaKnown RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 PYCR1P32322 319 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 CD68P34810 354 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 IDH3GP51553 393 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 HMGCS2P54868 508 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RAG2P55895 527 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 KIAA1211LQ6NV74 962 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RNF44Q7L0R7 432 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF584Q8IVC4 421 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ASB13Q8WXK3 278 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 SLAMF9Q96A28 289 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RNF170Q96K19 258 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 TEX37Q96LM6 180 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ELF4Q99607 663 aaPredicted RBP12.18□□□□□ -0.46
VAMP4-201ENST00000236192 DPH7Q9BTV6 452 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 TCRBV5S1A1TA0A578 114 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 NPIPA7E9PJI5 369 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 NPIPA8P0DM63 369 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 FBXW4P57775 412 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 PKIAP61925 76 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 TLE2Q04725 743 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ACTBL2Q562R1 376 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF383Q8NA42 475 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 REPS2Q8NFH8 660 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 OR2L3Q8NG85 312 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ZBTB8AQ96BR9 441 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 ALG8Q9BVK2 526 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 C11orf49Q9H6J7 331 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 WIF1Q9Y5W5 379 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 DCCP43146 1447 aa12.18□□□□□ -0.46
VAMP4-201ENST00000236192 NALCNQ8IZF0 1738 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ELOA3DA6NLF2 546 aaPredicted RBP12.17□□□□□ -0.46
VAMP4-201ENST00000236192 SNRPGP15A8MWD9 76 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 HPGDP15428 266 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 SMPD1P17405 629 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 CD81P60033 236 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 RAP1AP62834 184 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 IL10RBQ08334 325 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ELOA3BQ3SY89 546 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF789Q5FWF6 425 aa12.17□□□□□ -0.46
VAMP4-201ENST00000236192 TAC4Q86UU9 113 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms