RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CRTC1Q6UUV9 634 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 C17orf107Q6ZR85 190 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SLC26A9Q7LBE3 791 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ANKRD9Q96BM1 317 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 FAM46AQ96IP4 442 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 KCTD15Q96SI1 283 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 ULBP3Q9BZM4 244 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZDHHC5Q9C0B5 715 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SLC2A6Q9UGQ3 507 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 POLHQ9Y253 713 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PCDHGC4Q9Y5F7 938 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 LRRC3CA6NJW4 275 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 OR7A17O14581 309 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 DVL2O14641 736 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 KCNJ11Q14654 390 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SFRP5Q5T4F7 317 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 B3GNTL1Q67FW5 361 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 TMEM104Q8NE00 496 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 FOXRED1Q96CU9 486 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 C1QTNF3Q9BXJ4 246 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 FLRT1Q9NZU1 646 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PADI1Q9ULC6 663 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 HES2Q9Y543 173 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZNF814B7Z6K7 855 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NFKBIEO00221 500 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 XPNPEP2O43895 674 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PRPS1L1P21108 318 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 BCKDHBP21953 392 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 FPR2P25090 351 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 LSSP48449 732 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 DAOAP59103 153 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 GNB1P62873 340 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SIRPAP78324 504 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 Q6ZRG5 221 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CATSPERDQ86XM0 798 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 MAP4K3Q8IVH8 894 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TRUB1Q8WWH5 349 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 RHOJQ9H4E5 214 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 EXOSC1Q9Y3B2 195 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 ARHGEF40Q8TER5 1519 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 I6L893 689 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 ENPP1P22413 925 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ADPRHP54922 357 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CASP7P55210 303 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PPP2CBP62714 309 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZNF273Q14593 569 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 EIF4HQ15056 248 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 CHRNA6Q15825 494 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PCK2Q16822 640 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ANKDD1AQ495B1 522 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 GPRC6AQ5T6X5 926 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 HENMT1Q5T8I9 393 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 SGPP2Q8IWX5 399 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TDHQ8IZJ6 230 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 PCNPQ8WW12 178 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 SGK3Q96BR1 496 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 MCHR1Q99705 422 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 RAB1BQ9H0U4 201 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 IKZF5Q9H5V7 419 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CLK4Q9HAZ1 481 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.27□□□□□ -1.89
NEB-201ENST00000172853 GLOD5A6NK44 160 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 MCRIP1C9JLW8 97 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ALOX15BO15296 676 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 DNASE1P24855 282 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 RAB15P59190 212 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 DSC2Q02487 901 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TPBGQ13641 420 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 FGFBP1Q14512 234 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 IL34Q6ZMJ4 242 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ZDHHC21Q8IVQ6 265 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 OR10G2Q8NGC3 310 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CREB3L4Q8TEY5 395 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TMEM109Q9BVC6 243 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 MAN2C1Q9NTJ4 1040 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 RNF186Q9NXI6 227 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SAGE1Q9NXZ1 904 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SLC45A1Q9Y2W3 748 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 SLC22A23A1A5C7 686 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 C1orf226A1L170 272 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 EMC8O43402 210 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CTRB1P17538 263 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 GLRA2P23416 452 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 ICAM3P32942 547 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CRADDP78560 199 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 CTRB2Q6GPI1 263 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TECPR1Q7Z6L1 1165 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 OR4D6Q8NGJ1 314 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SSC4DQ8WTU2 575 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TRMT2BQ96GJ1 504 aaKnown RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 BTBD2Q9BX70 525 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 NIPAL2Q9H841 368 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 SLC7A8Q9UHI5 535 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 URGCP-MRPS24S4R325 110 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 TRBV11-1A0A0K0K1C0 115 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 HLA-DPB1P04440 258 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 HLA-EP13747 358 aa3.27□□□□□ -1.89
NEB-201ENST00000172853 KIR2DL1P43626 348 aaPredicted RBP3.27□□□□□ -1.89
NEB-201ENST00000172853 KIR2DL2P43627 348 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms