RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PPP2R1BP30154 601 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MPLP40238 635 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 UQCRFS1P47985 274 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LIMS1P48059 325 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TNFSF10P50591 281 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 DGKQP52824 942 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 HMGCS2P54868 508 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NXPH1P58417 271 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 HERV-K104P63124 156 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 HERVK_113P63132 956 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ERVK-25P63136 954 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LCN2P80188 198 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF528Q3MIS6 628 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CHRFAM7AQ494W8 412 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 HES5Q5TA89 166 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LIPJQ5W064 366 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MPZL3Q6UWV2 235 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 C20orf204Q6ZNR8 217 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CDHR3Q6ZTQ4 885 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 DPPA4Q7L190 304 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MEPCEQ7L2J0 689 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 KCNMB4Q86W47 210 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 PTOV1Q86YD1 416 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 DCP2Q8IU60 420 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ARHGEF19Q8IW93 802 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LRRC75AQ8NAA5 344 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 OR51G2Q8NGK0 314 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 FAM222BQ8WU58 562 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SMARCD2Q92925 531 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MOB3AQ96BX8 217 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 BIRC7Q96CA5 298 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MTERF3Q96E29 417 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SCARF2Q96GP6 870 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TGM7Q96PF1 710 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 CSPG4P5Q96PW8 444 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 PTDSS2Q9BVG9 487 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 DUSP23Q9BVJ7 150 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 C1QTNF7Q9BXJ2 289 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ERVK-6Q9BXR3 956 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MAP1LC3CQ9BXW4 147 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 DUSP16Q9BY84 665 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SEMA6CQ9H3T2 930 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 LRRC4CQ9HCJ2 640 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 NECAP2Q9NVZ3 263 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 IFNKQ9P0W0 207 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SERTAD3Q9UJW9 196 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF346Q9UL40 294 aaKnown RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 TMCO1Q9UM00 188 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 PRG3Q9Y2Y8 225 aaPredicted RBP4.5□□□□□ -1.69
SDCBP-213ENST00000630925 MMACHCQ9Y4U1 282 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 SPATA31E1Q6ZUB1 1445 aa4.5□□□□□ -1.69
SDCBP-213ENST00000630925 COL18A1P39060 1754 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF840PA6NDX5 716 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF729A6NN14 1252 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 B8ZZF3 427 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PRSS46E5RG02 174 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM189-UBE2V1I3L0A0 370 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 M0QXV9 152 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FFAR3O14843 346 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZBTB5O15062 677 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 STX7O15400 261 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 GPR42O15529 346 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 LDB2O43679 373 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SH3BGRLO75368 114 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 DEXIO95424 95 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CRYZL1O95825 349 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TGFB1P01137 390 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CEACAM5P06731 702 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NR2C1P13056 603 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CD82P27701 267 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 GSTM2P28161 218 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 IFNA8P32881 189 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 LIPAP38571 399 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PLP1P60201 277 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 RAE1P78406 368 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CDK3Q00526 305 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CFHR1Q03591 330 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 RBBP4Q09028 425 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 GRIK2Q13002 908 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TNXAQ16473 311 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SYPL1Q16563 259 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM249Q2WGJ8 235 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 WDR72Q3MJ13 1102 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 OR4F3Q6IEY1 312 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 REEP3Q6NUK4 255 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TCTN3Q6NUS6 607 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF562Q6V9R5 426 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 DEF8Q6ZN54 512 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 DPY19L3Q6ZPD9 716 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 G2E3Q7L622 706 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 DHDDSQ86SQ9 333 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NOXA1Q86UR1 476 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ALYREFQ86V81 257 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FUNDC1Q8IVP5 155 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 MFSD6LQ8IWD5 586 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NPAS3Q8IXF0 933 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CYP4Z2PQ8N1L4 340 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SDR9C7Q8NEX9 313 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms