RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SLC9A8Q9Y2E8 581 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 FRS3O43559 492 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ATE1O95260 518 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 EPPINO95925 133 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 TNNI3P19429 210 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 GABRA3P34903 492 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 NUBP1P53384 320 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 HSD17B7P56937 341 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 DUSP8Q13202 625 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 KEAP1Q14145 624 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 MICAQ29983 383 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ARHGAP11BQ3KRB8 267 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 DCST2Q5T1A1 773 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 TCTN3Q6NUS6 607 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZC3H14Q6PJT7 736 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 FRRS1Q6ZNA5 592 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF605Q86T29 641 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 PRSS58Q8IYP2 241 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR52P1PQ8NH57 321 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 FBLIM1Q8WUP2 373 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 PTCHD1Q96NR3 888 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 LRRN3Q9H3W5 708 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
TNFAIP3-209ENST00000619035 DSPPQ9NZW4 1301 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 TRBV4-1A0A0J9YWV2 114 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 HYAL3O43820 417 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 TPST2O60704 377 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 COQ9O75208 318 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 CKMT1AP12532 417 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 FBLP22087 321 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 NR4A1P22736 598 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 MAP2K4P45985 399 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 RNF144AP50876 292 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 MAP4K2Q12851 820 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 PIN1Q13526 163 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 MAD2L1BPQ15013 274 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 COLEC12Q5KU26 742 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZCCHC12Q6PEW1 402 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR4D9Q8NGE8 314 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR6T1Q8NGN1 323 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 ALPK1Q96QP1 1244 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 SDF2Q99470 211 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 PINK1Q9BXM7 581 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 ARRDC1-AS1Q9H2J1 176 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 NMNAT1Q9HAN9 279 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF304Q9HCX3 659 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 ERVK-19Q9WJR5 959 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 PCDHGA6Q9Y5G7 932 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 CLDN16Q9Y5I7 305 aa11.82□□□□□ -0.52
TNFAIP3-209ENST00000619035 IGHV5-10-1A0A0J9YXX1 117 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 GXYLT2A0PJZ3 443 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 H3BMQ9 156 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 INMTO95050 263 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 CCNB2O95067 398 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 LGI1O95970 557 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 STT3AP46977 705 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 GCGRP47871 477 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 IGLV3-21P80748 117 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 IL18R1Q13478 541 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 ARHGAP40Q5TG30 622 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 TYW3Q6IPR3 259 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 ENTHD1Q8IYW4 607 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 APH1BQ8WW43 257 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 CLIP3Q96DZ5 547 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 CCDC74BQ96LY2 380 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 COG8Q96MW5 612 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR6C1Q96RD1 312 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 NODALQ96S42 347 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 TRIM45Q9H8W5 580 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 AMBNQ9NP70 447 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 DUSP22Q9NRW4 184 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 PNO1Q9NRX1 252 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 FBXO34Q9NWN3 711 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 PCDHGB2Q9Y5G2 931 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 NPIPA5A0A0B4J1W7 369 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 A0A1B0GX78 115 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 CLDN24A6NM45 220 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 NPIPA7E9PJI5 369 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 DSCR3O14972 297 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 FOXD2O60548 495 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 WBP4O75554 376 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 STX11O75558 287 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 UGT2B17O75795 530 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 GASTP01350 101 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 NPIPA8P0DM63 369 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 S1PR1P21453 382 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 KRT20P35900 424 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 MPLP40238 635 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 DSG2Q14126 1118 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNHIT3Q15649 155 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 NNATQ16517 81 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 VWA2Q5GFL6 755 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 PHF19Q5T6S3 580 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 TMEM236Q5W0B7 351 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZBTB46Q86UZ6 589 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 PEX5LQ8IYB4 626 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms