RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ABCG4Q9H172 646 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 C20orf85Q9H1P6 137 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 SYNPO2LQ9H987 977 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 NOX3Q9HBY0 568 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 IL26Q9NPH9 171 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 OR2S2Q9NQN1 319 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 CACNA1IQ9P0X4 2223 aa13.21□□□□□ -0.29
TNFRSF11A-205ENST00000616710 RPS10-NUDT3A0A1W2PQS6 291 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 POM121BA6NF01 834 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 F5H0A9 414 aaPredicted RBP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF593O00488 134 aaPredicted RBP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KHNYNO15037 678 aaKnown RBP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TBL1XO60907 577 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RB1P06400 928 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 FABP1P07148 127 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MMP3P08254 477 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF35P13682 527 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CD52P31358 61 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LIM2P55344 173 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLBPQ14493 270 aaKnown RBP eCLIP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC25A35Q3KQZ1 300 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SCAMP4Q969E2 229 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RFKQ969G6 155 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF707Q96C28 371 aaPredicted RBP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ISG20L2Q9H9L3 353 aaKnown RBP13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC6A20Q9NP91 592 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GLS2Q9UI32 602 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 POMT2Q9UKY4 750 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CCL27Q9Y4X3 112 aa13.21□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF879B4DU55 563 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SLC2A10O95528 541 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LY86O95711 162 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 IL3P08700 152 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SAGP10523 405 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 NSG1P42857 185 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SOX2P48431 317 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TAP2Q03519 686 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF630Q2M218 657 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GPC2Q8N158 579 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 GPR26Q8NDV2 337 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PPP1R16AQ96I34 528 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KLHL15Q96M94 604 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SIGLEC11Q96RL6 698 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ADAM2Q99965 735 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PELOQ9BRX2 385 aaKnown RBP13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZCCHC3Q9NUD5 404 aaKnown RBP13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SOCS6O14544 535 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 WISP3O95389 354 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ETHE1O95571 254 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KCNE1P15382 129 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OMPP47874 163 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KIAA1211LQ6NV74 962 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 VRK3Q8IV63 474 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 BBS1Q8NFJ9 593 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PFDN5Q99471 154 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TAPBPLQ9BX59 468 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TMEM168Q9H0V1 697 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZDHHC6Q9H6R6 413 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ANKRD61A6NGH8 418 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 EFCAB14O75071 495 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 IGF2P01344 180 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 EDNRBP24530 442 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 POGLUT1Q8NBL1 392 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SEC22AQ96IW7 307 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PGAP2Q9UHJ9 254 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 FBXW2Q9UKT8 454 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 LIPT1Q9Y234 373 aa13.2□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KANTRA0A1W2PQU2 76 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 RPP14O95059 124 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 WNT1P04628 370 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 C8orf89P0DMQ9 161 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CPEP16870 476 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ELAVL4P26378 380 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PTH2RP49190 550 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MEOX2P50222 304 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CAPZA1P52907 286 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SNRPEP62304 92 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 TLE2Q04725 743 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ZNF385BQ569K4 471 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SFXN4Q6P4A7 337 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR52L1Q8NGH7 329 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 ATOH1Q92858 354 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PTP4A1Q93096 173 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PSME4Q14997 1843 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 SHISA3A0PJX4 238 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 D6RAR5 112 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 PRODHO43272 600 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 KLK8O60259 260 aa13.19□□□□□ -0.3
TNFRSF11A-205ENST00000616710 MMP11P24347 488 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms