RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ZNF33BQ06732 778 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 EIF2B1Q14232 305 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 LTB4RQ15722 352 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 CEBPEQ15744 281 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 PPP1R3AQ16821 1122 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC22A6Q4U2R8 563 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 MS4A13Q5J8X5 152 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 BEND6Q5SZJ8 279 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 PRR5LQ6MZQ0 368 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ZCCHC12Q6PEW1 402 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 PAQR9Q6ZVX9 377 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC39A11Q8N1S5 342 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 LZTS2Q9BRK4 669 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 TCHPQ9BT92 498 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 CARD6Q9BX69 1037 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 RWDD1Q9H446 243 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 FAM114A2Q9NRY5 505 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ACTR3BQ9P1U1 418 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 P2RX2Q9UBL9 471 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 GHRLQ9UBU3 117 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 CFAP45Q9UL16 551 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 DHRS7Q9Y394 339 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 SMAD5-AS1Q9Y6J3 95 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ABCC4O15439 1325 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 NSD2O96028 1365 aa3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMCHD1-213ENST00000609587 ZCCHC6Q5VYS8 1495 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 RGSL1A5PLK6 1076 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 CCDC169A6NNP5 214 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 UBXN8O00124 270 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 KIF2AO00139 706 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 BCL2L11O43521 198 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 SMPD2O60906 423 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 RHBDL1O75783 438 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 TOXO94900 526 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 NDUFA7O95182 113 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 PRAMEF12O95522 483 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 HEXBP07686 556 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 WNT2P09544 360 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 PVRP15151 417 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 DNAJB1P25685 340 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 IFNAR2P48551 515 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 MRPS6P82932 125 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 MECOMQ03112 1051 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 ZIC1Q15915 447 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 INAQ16352 499 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 MICAQ29983 383 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 DMKNQ6E0U4 476 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF774Q6NX45 483 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF600Q6ZNG1 722 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 LPCAT2Q7L5N7 544 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 NET1Q7Z628 596 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 SYVN1Q86TM6 617 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 SERINC5Q86VE9 423 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 MARCH9Q86YJ5 346 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 GMCL1P1Q8NEA9 526 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 RHOXF1Q8NHV9 184 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 RFESDQ8TAC1 157 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 PIWIL1Q96J94 861 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 VPS39Q96JC1 886 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF396Q96N95 335 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 ACTR8Q9H981 624 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 VPS37BQ9H9H4 285 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 DCAF13Q9NV06 445 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 KLRF1Q9NZS2 232 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 SENP1Q9P0U3 644 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 KIF3AQ9Y496 699 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 RNF115Q9Y4L5 304 aa3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-213ENST00000609587 KDRP35968 1356 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 LINC00854A0A1B0GVQ3 168 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 FAM230AA0A1W2PPH8 454 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 TTC26A0AVF1 554 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 ZSCAN5CA6NGD5 496 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 H3BTX0 84 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 SAP18O00422 153 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 PDXKO00764 312 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 IMPA2O14732 288 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 ALOX15BO15296 676 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 RIPK2O43353 540 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 SLITRK3O94933 977 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 PAHP00439 452 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 RRASP10301 218 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 TSPAN8P19075 237 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 CCND2P30279 289 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 ACAA2P42765 397 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 NOVP48745 357 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 CSRP3P50461 194 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 MTTPP55157 894 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 ZP4Q12836 540 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 SLC10A1Q14973 349 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 C12orf60Q5U649 245 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 RNLSQ5VYX0 342 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 PNCKQ6P2M8 343 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 LEG1Q6P5S2 330 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 ZNF562Q6V9R5 426 aa3.3□□□□□ -1.88
SMCHD1-213ENST00000609587 ADCK1Q86TW2 530 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms