RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 COMMD3Q9UBI1 195 aa13.76□□□□□ -0.21
CTCFL-219ENST00000608720 NDRG2Q9UN36 371 aaKnown RBP13.76□□□□□ -0.21
CTCFL-219ENST00000608720 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
CTCFL-219ENST00000608720 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
CTCFL-219ENST00000608720 CDH23Q9H251 3354 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 PRR23AA6NEV1 266 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 HLA-DPB1P04440 258 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 HMGN2P05204 90 aaKnown RBP13.75□□□□□ -0.21
CTCFL-219ENST00000608720 LINC00271P0C7V0 271 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 SLC1A3P43003 542 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 MAP2K3P46734 347 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ZNF311Q5JNZ3 666 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 KIAA1161Q6NSJ0 714 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ZNF793Q6ZN11 406 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 RRM2BQ7LG56 351 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 HMGN2P46Q86SG4 172 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 POGLUT1Q8NBL1 392 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 OR8D4Q8NGM9 314 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 UBASH3BQ8TF42 649 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 CHFRQ96EP1 664 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 OTUB1Q96FW1 271 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ANKRD19PQ9H560 264 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 CLCA2Q9UQC9 943 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 SZT2Q5T011 3432 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 WASHC1A8K0Z3 465 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 CHST10O43529 356 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 SLC35G4P0C7Q5 338 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ENPP1P22413 925 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 APEX1P27695 318 aaKnown RBP13.75□□□□□ -0.21
CTCFL-219ENST00000608720 SSTR4P31391 388 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 STAT5AP42229 794 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 CDH11P55287 796 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ACSM1Q08AH1 577 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ST3GAL3Q11203 375 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 DSG2Q14126 1118 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 MFSD13AQ14CX5 517 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 PLPP4Q5VZY2 271 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 MZT2AQ6P582 158 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 WASH2PQ6VEQ5 465 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 Q8N402 240 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 DUSP18Q8NEJ0 188 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 PIGXQ8TBF5 258 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 OSTF1Q92882 214 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ARHGDIGQ99819 225 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 TM7SF3Q9NS93 570 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 RBFOX1Q9NWB1 397 aaKnown RBP13.75□□□□□ -0.21
CTCFL-219ENST00000608720 ELF5Q9UKW6 265 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-219ENST00000608720 CCDC88CQ9P219 2028 aa13.75□□□□□ -0.21
CTCFL-219ENST00000608720 SMIM30A4D0T7 59 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 MEN1O00255 615 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 PPM1DO15297 605 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 LRRTM2O43300 516 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 ERAL1O75616 437 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 PRKAR1AP10644 381 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 EVX1P49640 407 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 CLCNKAP51800 687 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 POU6F2P78424 691 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 CDK3Q00526 305 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 MAP4K2Q12851 820 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 EIF2B5Q13144 721 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 UAP1L1Q3KQV9 507 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 SDE2Q6IQ49 451 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 LHFPL3Q86UP9 236 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 MEX3DQ86XN8 651 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 LINC01555Q8NAE3 123 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 OR4M2Q8NGB6 313 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 LRRC3BQ96PB8 259 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 DCLRE1CQ96SD1 692 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 BEX2Q9BXY8 128 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 BTBD1Q9H0C5 482 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 MED17Q9NVC6 651 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 GLOD5A6NK44 160 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 AKAP8O43823 692 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 CSF2RAP15509 400 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 CFL1P23528 166 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 OMPP47874 163 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 CAV3P56539 151 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 PRR5P85299 388 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 HOXC5Q00444 222 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 MAB21L1Q13394 359 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 ZIC1Q15915 447 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 PXDC1Q5TGL8 231 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 C1orf53Q5VUE5 145 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 AADACL4Q5VUY2 407 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 SHFQ7M4L6 423 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 TRIM48Q8IWZ4 208 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 ETFBKMTQ8IXQ9 262 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 UBE2J2Q8N2K1 259 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 KLHL36Q8N4N3 616 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 ARIH2OSQ8N7S6 290 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 SMG7Q92540 1137 aaKnown RBP13.74□□□□□ -0.21
CTCFL-219ENST00000608720 RAB7BQ96AH8 199 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 FERD3LQ96RJ6 166 aa13.74□□□□□ -0.21
CTCFL-219ENST00000608720 ATF6BQ99941 703 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms