RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FAM186AA6NE01 2351 aa20.91■□□□□ 0.94
IRF3-228ENST00000601291 SDK2Q58EX2 2172 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 KIAA0513O60268 411 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 RFX3P48380 749 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 RNF4P78317 190 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 GPR68Q15743 365 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 EXT1Q16394 746 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 DECR1Q16698 335 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 PEX5LQ8IYB4 626 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 IL22RA1Q8N6P7 574 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 OR4N2Q8NGD1 307 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 OR8K3Q8NH51 312 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 GEMIN6Q8WXD5 167 aaKnown RBP20.9■□□□□ 0.94
IRF3-228ENST00000601291 LRTOMTQ8WZ04 291 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 PROX1Q92786 737 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 NXF5Q9H1B4 397 aaKnown RBP20.9■□□□□ 0.94
IRF3-228ENST00000601291 ASCL3Q9NQ33 180 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 THSD1Q9NS62 852 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 IFT52Q9Y366 437 aa20.9■□□□□ 0.94
IRF3-228ENST00000601291 TRBV11-1A0A0K0K1C0 115 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 A0A1W2PQ72 361 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 DCDC2BA2VCK2 349 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 DXOO77932 396 aaKnown RBP20.89■□□□□ 0.94
IRF3-228ENST00000601291 ZIC2O95409 532 aaPredicted RBP20.89■□□□□ 0.94
IRF3-228ENST00000601291 SEMG1P04279 462 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 FABP3P05413 133 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 PABPC4LP0CB38 370 aaKnown RBP20.89■□□□□ 0.94
IRF3-228ENST00000601291 COX6A1P12074 109 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 CD247P20963 164 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 OTX2P32243 289 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 KCNJ5P48544 419 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 PSMD4P55036 377 aaKnown RBP20.89■□□□□ 0.94
IRF3-228ENST00000601291 ZNF311Q5JNZ3 666 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 ZDHHC21Q8IVQ6 265 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 BCORP1Q8N888 145 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 PKP2Q99959 881 aa20.89■□□□□ 0.94
IRF3-228ENST00000601291 QRSL1Q9H0R6 528 aaKnown RBP20.89■□□□□ 0.94
IRF3-228ENST00000601291 PTPRBP23467 1997 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 TMEM229AB2RXF0 380 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 SOCS6O14544 535 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 TERTO14746 1132 aaKnown RBP20.89■□□□□ 0.93
IRF3-228ENST00000601291 ACOX3O15254 700 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 MT-ND1P03886 318 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 FESP07332 822 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 MAGEA2P43356 314 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 KCNJ10P78508 379 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 DUSP7Q16829 419 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.89■□□□□ 0.93
IRF3-228ENST00000601291 BTBD16Q32M84 506 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 FLYWCH1Q4VC44 716 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 KIRREL2Q6UWL6 708 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 NDUFAF7Q7L592 441 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 LILRA2Q8N149 483 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 OR11G2Q8NGC1 345 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 OR5L2Q8NGL0 311 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 OR52P1PQ8NH57 321 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 NUBPLQ8TB37 319 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 NKD1Q969G9 470 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 TP53INP1Q96A56 240 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 HSPBAP1Q96EW2 488 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 PINK1Q9BXM7 581 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 IL1RAPQ9NPH3 570 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 AGPAT4Q9NRZ5 378 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 RIMS3Q9UJD0 308 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 ZNF223Q9UK11 482 aaPredicted RBP20.89■□□□□ 0.93
IRF3-228ENST00000601291 ZNF232Q9UNY5 417 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 PCDHGA6Q9Y5G7 932 aa20.89■□□□□ 0.93
IRF3-228ENST00000601291 NSG1A0A0A6YYJ2 146 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 LOC101059948A0A1B0GTJ6 334 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 DBIP07108 87 aaKnown RBP20.88■□□□□ 0.93
IRF3-228ENST00000601291 NR0B1P51843 470 aaKnown RBP20.88■□□□□ 0.93
IRF3-228ENST00000601291 LARS2Q15031 903 aaKnown RBP20.88■□□□□ 0.93
IRF3-228ENST00000601291 AP1ARQ63HQ0 302 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 PPP1R32Q7Z5V6 425 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 ZNF441Q8N8Z8 693 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 KIAA1143Q96AT1 154 aaPredicted RBP20.88■□□□□ 0.93
IRF3-228ENST00000601291 ZNF354BQ96LW1 612 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 FBXO34Q9NWN3 711 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 SLC13A4Q9UKG4 626 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 SH3GLB1Q9Y371 365 aa20.88■□□□□ 0.93
IRF3-228ENST00000601291 AGAP5A6NIR3 686 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 TO15178 435 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 DEAF1O75398 565 aaPredicted RBP20.87■□□□□ 0.93
IRF3-228ENST00000601291 ZFAND5O76080 213 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 LDLRP01130 860 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 THBS1P07996 1170 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 IL7RP16871 459 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 PRKAR1BP31321 381 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 KRT20P35900 424 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 KCNC4Q03721 635 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 ATP6AP1Q15904 470 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 PLAG1Q6DJT9 500 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 HMGN2P46Q86SG4 172 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 DTX1Q86Y01 620 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 RAB43Q86YS6 212 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 ZSCAN1Q8NBB4 408 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 GPR32P1Q8NGA4 272 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 AK5Q9Y6K8 562 aa20.87■□□□□ 0.93
IRF3-228ENST00000601291 CCDC88CQ9P219 2028 aa20.86■□□□□ 0.93
IRF3-228ENST00000601291 CST1P01037 141 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms