RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 PPP1R32Q7Z5V6 425 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 ADGRG5Q8IZF4 528 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF619Q8N2I2 560 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF321PQ8N8H1 164 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 APCDD1LQ8NCL9 501 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 PAPD5Q8NDF8 572 aaKnown RBP14.12□□□□□ -0.15
TRIM28-209ENST00000597423 OR11G2Q8NGC1 345 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 FAM110BQ8TC76 370 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 SLC47A1Q96FL8 570 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 IMMP1LQ96LU5 166 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 SEPHS2Q99611 448 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF350Q9GZX5 532 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 SAP130Q9H0E3 1048 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 EVA1AQ9H8M9 152 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 RNPEPL1Q9HAU8 725 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 MMP25Q9NPA2 562 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 KLHL28Q9NXS3 571 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 STX18Q9P2W9 335 aaKnown RBP14.12□□□□□ -0.15
TRIM28-209ENST00000597423 KIF26BQ2KJY2 2108 aa14.12□□□□□ -0.15
TRIM28-209ENST00000597423 GXYLT2A0PJZ3 443 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 PRAMEF27A3QJZ7 478 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 SOCS6O14544 535 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 GCM2O75603 506 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-209ENST00000597423 MFN2O95140 757 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 IL33O95760 270 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 COX6A1P12074 109 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 ITGA2P17301 1181 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 NR0B1P51843 470 aaKnown RBP14.11□□□□□ -0.15
TRIM28-209ENST00000597423 RPS18P62269 152 aaKnown RBP14.11□□□□□ -0.15
TRIM28-209ENST00000597423 GPR68Q15743 365 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRIM28-209ENST00000597423 FLYWCH1Q4VC44 716 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 IFI44LQ53G44 452 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF311Q5JNZ3 666 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 RPS26P11Q5JNZ5 115 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-209ENST00000597423 NUP210LQ5VU65 1888 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 FIGNL1Q6PIW4 674 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 C9orf40Q8IXQ3 194 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 SLC15A4Q8N697 577 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 BCORP1Q8N888 145 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 OR52P1PQ8NH57 321 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 TAMM41Q96BW9 452 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 CHID1Q9BWS9 393 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 PINK1Q9BXM7 581 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 SLC38A1Q9H2H9 487 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 C6orf203Q9P0P8 240 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-209ENST00000597423 MKLN1Q9UL63 735 aa14.11□□□□□ -0.15
TRIM28-209ENST00000597423 SCN2AQ99250 2005 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 H0Y3Z8 333 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FCMRO60667 390 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 THBS1P07996 1170 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 HPGDP15428 266 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 IL7RP16871 459 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 NAGAP17050 411 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 ENDOUP21128 410 aaKnown RBP14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FASP25445 335 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 IL12BP29460 328 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 PRKAR1BP31321 381 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 RFX3P48380 749 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 SLC34A1Q06495 639 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FUT5Q11128 374 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 EIPR1Q53HC9 387 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FAM69BQ5VUD6 431 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 TYW3Q6IPR3 259 aaKnown RBP14.1□□□□□ -0.15
TRIM28-209ENST00000597423 NPSR1Q6W5P4 371 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FRRS1Q6ZNA5 592 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 KBTBD2Q8IY47 623 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 SLC34A3Q8N130 599 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF527Q8NB42 609 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 SLC22A8Q8TCC7 542 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 ELP5Q8TE02 316 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 GEMIN6Q8WXD5 167 aaKnown RBP14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FAM122AQ96E09 287 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 HSH2DQ96JZ2 352 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FER1L6-AS2Q96M78 137 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 NXF5Q9H1B4 397 aaKnown RBP14.1□□□□□ -0.15
TRIM28-209ENST00000597423 RUBCNLQ9H714 662 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 ZNF160Q9HCG1 818 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-209ENST00000597423 WDR70Q9NW82 654 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 P4HTMQ9NXG6 502 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 DTX4Q9Y2E6 619 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 SLC9A8Q9Y2E8 581 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 FAM32AQ9Y421 112 aaKnown RBP14.1□□□□□ -0.15
TRIM28-209ENST00000597423 V9GYQ6 96 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 DSPPQ9NZW4 1301 aa14.1□□□□□ -0.15
TRIM28-209ENST00000597423 AGAP5A6NIR3 686 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 ABCB7O75027 752 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 REM1O75628 298 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 PABPC4LP0CB38 370 aaKnown RBP14.09□□□□□ -0.15
TRIM28-209ENST00000597423 ANPEPP15144 967 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 F8A1P23610 371 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 KCNJ5P48544 419 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 CLK3P49761 638 aaKnown RBP14.09□□□□□ -0.15
TRIM28-209ENST00000597423 PNLIPRP2P54317 469 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 ATP12AP54707 1039 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 KCNC4Q03721 635 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 EFR3AQ14156 821 aa14.09□□□□□ -0.15
TRIM28-209ENST00000597423 SNCBQ16143 134 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms