RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 CANT1Q8WVQ1 401 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 SPATA5L1Q9BVQ7 753 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 S100A14Q9HCY8 104 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 MMP25Q9NPA2 562 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 POLE3Q9NRF9 147 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 P4HTMQ9NXG6 502 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 SEC14L3Q9UDX4 400 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 WASF3Q9UPY6 502 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 AURKCQ9UQB9 309 aa13.56□□□□□ -0.24
VRK3-212ENST00000596814 PEX12O00623 359 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 TO15178 435 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 SUV39H1O43463 412 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 KIAA0513O60268 411 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 FCMRO60667 390 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 PRKD3O94806 890 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 ALPPP05187 535 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 PLA2G5P39877 138 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 PSPHP78330 225 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 RIPK1Q13546 671 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 DECR1Q16698 335 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 AAGABQ6PD74 315 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 VASH2Q86V25 355 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 ARMC8Q8IUR7 673 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 BCORP1Q8N888 145 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 FAM110BQ8TC76 370 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 TP53INP1Q96A56 240 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 HSPBAP1Q96EW2 488 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 DUS3LQ96G46 650 aaKnown RBP13.55□□□□□ -0.24
VRK3-212ENST00000596814 IP6K3Q96PC2 410 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 SEPHS2Q99611 448 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 G6PC3Q9BUM1 346 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 UGT2B28Q9BY64 529 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 CACYBPQ9HB71 228 aaKnown RBP13.55□□□□□ -0.24
VRK3-212ENST00000596814 FBXO34Q9NWN3 711 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
VRK3-212ENST00000596814 CDC14CA4D256 554 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 H0Y3Z8 333 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 MFN2O95140 757 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 IGKV1D-16P01601 117 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 CELA2AP08217 269 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 GUSBP08236 651 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 SLC7A1P30825 629 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 AP2B1P63010 937 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 ATP1A4Q13733 1029 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 RCN1Q15293 331 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 GPR68Q15743 365 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 FLYWCH1Q4VC44 716 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 FAM98BQ52LJ0 330 aaKnown RBP13.54□□□□□ -0.24
VRK3-212ENST00000596814 SMYD1Q8NB12 490 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 OR10Q1Q8NGQ4 319 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 SPPL2AQ8TCT8 520 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 THAP3Q8WTV1 239 aaPredicted RBP13.54□□□□□ -0.24
VRK3-212ENST00000596814 RASSF5Q8WWW0 418 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 SLC47A1Q96FL8 570 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 PYURFQ96I23 114 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 TPD52L3Q96J77 140 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 LMF1Q96S06 567 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 SAP130Q9H0E3 1048 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 QRSL1Q9H0R6 528 aaKnown RBP13.54□□□□□ -0.24
VRK3-212ENST00000596814 TRIM45Q9H8W5 580 aaPredicted RBP13.54□□□□□ -0.24
VRK3-212ENST00000596814 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
VRK3-212ENST00000596814 MRTO4Q9UKD2 239 aaKnown RBP13.54□□□□□ -0.24
VRK3-212ENST00000596814 DCHS1Q96JQ0 3298 aa13.54□□□□□ -0.24
VRK3-212ENST00000596814 ICAM2P13598 275 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 PSMD4P55036 377 aaKnown RBP13.53□□□□□ -0.24
VRK3-212ENST00000596814 NRG3P56975 720 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 SELENOWP63302 87 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 CHRNB3Q05901 458 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 PLCXD2Q0VAA5 305 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 CLN3Q13286 438 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.53□□□□□ -0.24
VRK3-212ENST00000596814 TBCELQ5QJ74 424 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 VTCN1Q7Z7D3 282 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 ZAR1Q86SH2 424 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 PEX5LQ8IYB4 626 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 PRR22Q8IZ63 422 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 SLC34A3Q8N130 599 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 TMBIM1Q969X1 311 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 SLCO4A1Q96BD0 722 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 DOHHQ9BU89 302 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 MAGIXQ9H6Y5 334 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 LIN28AQ9H9Z2 209 aaKnown RBP13.53□□□□□ -0.24
VRK3-212ENST00000596814 CCM2LQ9NUG4 571 aaPredicted RBP13.53□□□□□ -0.24
VRK3-212ENST00000596814 MSRB2Q9Y3D2 182 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 AP4S1Q9Y587 144 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 EXPH5Q8NEV8 1989 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 SPTBN4Q9H254 2564 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 NPIPA5A0A0B4J1W7 369 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 NPIPA7E9PJI5 369 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 H3BNX3 289 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 ATP6V1G2O95670 118 aa13.53□□□□□ -0.24
VRK3-212ENST00000596814 IL33O95760 270 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms