RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PAQR8Q8TEZ7 354 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 XAGE5Q8WWM1 108 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 PIK3R3Q92569 461 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 CDS1Q92903 461 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 SCMH1Q96GD3 660 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 ADOQ96SZ5 270 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 MFRPQ9BY79 579 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 SLC6A13Q9NSD5 602 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 SLAMF8Q9P0V8 285 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-220ENST00000588917 ANAPC2Q9UJX6 822 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 DOCK10Q96BY6 2186 aa18.01■□□□□ 0.47
CIRBP-220ENST00000588917 TMEM247A6NEH6 219 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 FBP2O00757 339 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 SUV39H1O43463 412 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 KCNK2O95069 426 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 GUSBP08236 651 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 HOXB9P17482 250 aaPredicted RBP18■□□□□ 0.47
CIRBP-220ENST00000588917 ATP6V1C1P21283 382 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 CNR1P21554 472 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 CRATP43155 626 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 CD97P48960 835 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 CLK3P49761 638 aaKnown RBP18■□□□□ 0.47
CIRBP-220ENST00000588917 SNTA1Q13424 505 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 GNA13Q14344 377 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 CPEB4Q17RY0 729 aaKnown RBP eCLIP18■□□□□ 0.47
CIRBP-220ENST00000588917 TRMT5Q32P41 509 aaKnown RBP18■□□□□ 0.47
CIRBP-220ENST00000588917 ARHGAP11BQ3KRB8 267 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 PLEKHN1Q494U1 663 aaPredicted RBP18■□□□□ 0.47
CIRBP-220ENST00000588917 RUNDC3AQ59EK9 446 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 SLC6A19Q695T7 634 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 TMEM81Q6P7N7 255 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 C16orf62Q7Z3J2 963 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 ZNF227Q86WZ6 799 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 PSD4Q8NDX1 1056 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 FBXO30Q8TB52 745 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 ROPN1LQ96C74 230 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 LRRC58Q96CX6 371 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 RMND5BQ96G75 393 aaPredicted RBP18■□□□□ 0.47
CIRBP-220ENST00000588917 ANKRD27Q96NW4 1050 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 CGREF1Q99674 301 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 HOXD1Q9GZZ0 328 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 HHATLQ9HCP6 504 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 SLC25A37Q9NYZ2 338 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 VAPAQ9P0L0 249 aa18■□□□□ 0.47
CIRBP-220ENST00000588917 TRBV5-3A0A0A0MS03 114 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 GXYLT2A0PJZ3 443 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 OR12D1P0DN82 309 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 ST13P50502 369 aaKnown RBP17.99■□□□□ 0.47
CIRBP-220ENST00000588917 MNAT1P51948 309 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 FBXW4P57775 412 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 RPS26P62854 115 aaKnown RBP17.99■□□□□ 0.47
CIRBP-220ENST00000588917 ART3Q13508 389 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 RGNQ15493 299 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 INAQ16352 499 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 REP15Q6BDI9 236 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 MDGA2Q7Z553 956 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 TREML1Q86YW5 311 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 CHDHQ8NE62 594 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-220ENST00000588917 OR5D16Q8NGK9 328 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 OR5M3Q8NGP4 307 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 SPPL2AQ8TCT8 520 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 THUMPD3Q9BV44 507 aaKnown RBP17.99■□□□□ 0.47
CIRBP-220ENST00000588917 SH2D2AQ9NP31 389 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 CSAG2Q9Y5P2 127 aa17.99■□□□□ 0.47
CIRBP-220ENST00000588917 NME2P1O60361 137 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 UGT2B11O75310 529 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 STX11O75558 287 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 UNC5CO95185 931 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 SNX4O95219 450 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 GPX2P18283 190 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 NME2P22392 152 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 RFX3P48380 749 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 KRT72Q14CN4 511 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 GTDC1Q4AE62 458 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 NADK2Q4G0N4 442 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 DCST2Q5T1A1 773 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 AP1ARQ63HQ0 302 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 HEPHL1Q6MZM0 1159 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 SLC30A6Q6NXT4 461 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 TNFAIP8L2Q6P589 184 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-220ENST00000588917 MSRB3Q8IXL7 192 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 FBXW8Q8N3Y1 598 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 POU5F2Q8N7G0 328 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 OR10G3Q8NGC4 313 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 PNPT1Q8TCS8 783 aaKnown RBP17.98■□□□□ 0.47
CIRBP-220ENST00000588917 PMM1Q92871 262 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 HGDQ93099 445 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 EFHD2Q96C19 240 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-220ENST00000588917 HOPXQ9BPY8 73 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-220ENST00000588917 SERHL2Q9H4I8 314 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 IL1RL2Q9HB29 575 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 KLHL1Q9NR64 748 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 POLE3Q9NRF9 147 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 CALML5Q9NZT1 146 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 AP3M1Q9Y2T2 418 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 CHCHD2Q9Y6H1 151 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-220ENST00000588917 CPAMD8Q8IZJ3 1885 aa17.98■□□□□ 0.47
CIRBP-220ENST00000588917 HMGN4O00479 90 aa17.97■□□□□ 0.47
CIRBP-220ENST00000588917 AIM2O14862 343 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms