RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 RPS3AP61247 264 aaKnown RBP10.22□□□□□ -0.77
ACTN4-209ENST00000586538 PSG6Q00889 435 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 SLC18A2Q05940 514 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 LRIG3Q6UXM1 1119 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 NPSR1Q6W5P4 371 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 GSPT2Q8IYD1 628 aaKnown RBP10.22□□□□□ -0.77
ACTN4-209ENST00000586538 ZZZ3Q8IYH5 903 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 NATD1Q8N6N6 113 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 NAXEQ8NCW5 288 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.22□□□□□ -0.77
ACTN4-209ENST00000586538 RNF138Q8WVD3 245 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 PPCDCQ96CD2 204 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 MTERF3Q96E29 417 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 APOPT1Q96IL0 206 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 AMDHD1Q96NU7 426 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 LMF2Q9BU23 707 aaKnown RBP10.22□□□□□ -0.77
ACTN4-209ENST00000586538 TBL1XR1Q9BZK7 514 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 GLIPR2Q9H4G4 154 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 L2HGDHQ9H9P8 463 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 OTOGQ6ZRI0 2925 aa10.22□□□□□ -0.77
ACTN4-209ENST00000586538 DCHS2Q6V1P9 2916 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 FREM3P0C091 2139 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 UQCRHLA0A096LP55 91 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 CLCA1A8K7I4 914 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 UPK1AO00322 258 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 NPHS1O60500 1241 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 PSMG1O95456 288 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 IL33O95760 270 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 SHBGP04278 402 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 NUDT17P0C025 328 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 EPXP11678 715 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 FCGR2AP12318 317 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 HPGDP15428 266 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ZNF708P17019 499 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 POU3F2P20265 443 aaPredicted RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 DNASE1P24855 282 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 TACR1P25103 407 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 SOX18P35713 384 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 HPCAL1P37235 193 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ART1P52961 327 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 MANFP55145 182 aaKnown RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 DLX5P56178 289 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 KRTAP10-9P60411 292 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 RPL38P63173 70 aaKnown RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 PRR5P85299 388 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 OCRLQ01968 901 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 SRYQ05066 204 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 C17orf67Q0P5P2 114 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 GLYR1Q49A26 553 aaPredicted RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 RAET1LQ5VY80 246 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 KANK2Q63ZY3 851 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ZCCHC12Q6PEW1 402 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 SH2D5Q6ZV89 423 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 CAMKMTQ7Z624 323 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ADGRE4PQ86SQ3 457 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 MISPQ8IVT2 679 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 KIRREL3Q8IZU9 778 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 C4orf33Q8N1A6 199 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 CDRT4Q8N9R6 151 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 SIMC1Q8NDZ2 872 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 EPS8L3Q8TE67 593 aaKnown RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 GFM2Q969S9 779 aaKnown RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ELP4Q96EB1 424 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 PPP3R2Q96LZ3 170 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 TUBA1CQ9BQE3 449 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 YIPF4Q9BSR8 244 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 RBM24Q9BX46 236 aaKnown RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 REEP4Q9H6H4 257 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 FANCFQ9NPI8 374 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 RASSF1Q9NS23 344 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ACSS1Q9NUB1 689 aaPredicted RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ATAD3AQ9NVI7 634 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 PAQR5Q9NXK6 330 aaPredicted RBP10.21□□□□□ -0.77
ACTN4-209ENST00000586538 CRIM1Q9NZV1 1036 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 NDRG3Q9UGV2 375 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 PACSIN3Q9UKS6 424 aa10.21□□□□□ -0.77
ACTN4-209ENST00000586538 ANKHD1Q8IWZ3 2542 aaKnown RBP10.21□□□□□ -0.78
ACTN4-209ENST00000586538 TLDC2A0PJX2 215 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 CASKO14936 926 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 PDZD2O15018 2839 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 SCO2O43819 266 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 FGF4P08620 206 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 KRT16P08779 473 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 HK1P19367 917 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 DNAJA1P31689 397 aaKnown RBP10.2□□□□□ -0.78
ACTN4-209ENST00000586538 SERPINB4P48594 390 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 PCYT1AP49585 367 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 LHX2P50458 406 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 HSPB3Q12988 150 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 PCLAFQ15004 111 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 DAZAP2Q15038 168 aaPredicted RBP10.2□□□□□ -0.78
ACTN4-209ENST00000586538 KIAA0040Q15053 153 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 TESK1Q15569 626 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 ATP6AP1LQ52LC2 224 aa10.2□□□□□ -0.78
ACTN4-209ENST00000586538 DCST1Q5T197 706 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms