RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ATP8B1O43520 1251 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 TRIM13O60858 407 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 SMNDC1O75940 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
SS18-222ENST00000582792 CBX7O95931 251 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 OTCP00480 354 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 KLK1P06870 262 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 DRD5P21918 477 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 SERPINB5P36952 375 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 CD79BP40259 229 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PPICP45877 212 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 CCNG1P51959 295 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PKNOX1P55347 436 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PPP2R2BQ00005 443 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 HMGCS1Q01581 520 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PCLAFQ15004 111 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 CCNYL2Q5T2Q4 361 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 OR2A2Q6IF42 318 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 C20orf204Q6ZNR8 217 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PAGE2Q7Z2X7 111 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 SPATA3Q8NHX4 192 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 ATP6V1E2Q96A05 226 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 TMCO6Q96DC7 493 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 STARD4Q96DR4 205 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 DTNBP1Q96EV8 351 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 PERPQ96FX8 193 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 SFXN2Q96NB2 322 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 COL21A1Q96P44 957 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 ZNF382Q96SR6 550 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 TRMOQ9BU70 441 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 MED18Q9BUE0 208 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 MRPL1Q9BYD6 325 aaKnown RBP12.27□□□□□ -0.45
SS18-222ENST00000582792 NOL11Q9H8H0 719 aaKnown RBP12.27□□□□□ -0.45
SS18-222ENST00000582792 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 FBXL2Q9UKC9 423 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 MRPS18CQ9Y3D5 142 aaKnown RBP12.27□□□□□ -0.45
SS18-222ENST00000582792 PCDHA9Q9Y5H5 950 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 WIF1Q9Y5W5 379 aa12.27□□□□□ -0.45
SS18-222ENST00000582792 RAI1Q7Z5J4 1906 aaPredicted RBP12.27□□□□□ -0.45
SS18-222ENST00000582792 C1orf226A1L170 272 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 FRG2CA6NGY1 282 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 OR6C70A6NIJ9 312 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 ERAL1O75616 437 aaKnown RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 SUPT7LO94864 414 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 BPGMP07738 259 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 DHRS4L1P0CG22 281 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 CSNK2A2P19784 350 aaPredicted RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 CCKARP32238 428 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 UGT2B10P36537 528 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 FEN1P39748 380 aaKnown RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 MAPK12P53778 367 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 MAGOHP61326 146 aaKnown RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 GALNT1Q10472 559 aaPredicted RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 LCP2Q13094 533 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 TRAF3Q13114 568 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 BCL2A1Q16548 175 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 FRG2Q64ET8 278 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 VWA1Q6PCB0 445 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 ZNF474Q6S9Z5 364 aaPredicted RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 CXXC5Q7LFL8 322 aaKnown RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 P4HA3Q7Z4N8 544 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 MILR1Q7Z6M3 343 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 C10orf107Q8IVU9 208 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 METTL4Q8N3J2 472 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 GOLGA6L1Q8N7Z2 621 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 CNEP1R1Q8N9A8 125 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 ADCY4Q8NFM4 1077 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 OR52R1Q8NGF1 315 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 TRPC4APQ8TEL6 797 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 MARK4Q96L34 752 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 ATP6V1G3Q96LB4 118 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 NSUN5Q96P11 429 aaKnown RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 CDK15Q96Q40 435 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 FRG2BQ96QU4 278 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 GSX2Q9BZM3 304 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 C12orf65Q9H3J6 166 aaKnown RBP12.26□□□□□ -0.45
SS18-222ENST00000582792 GSTO2Q9H4Y5 243 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 AHSPQ9NZD4 102 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 PRODH2Q9UF12 536 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 TRPS1Q9UHF7 1281 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 DKKL1Q9UK85 242 aa12.26□□□□□ -0.45
SS18-222ENST00000582792 DSCAMO60469 2012 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 HMGB1P1B2RPK0 211 aaPredicted RBP12.25□□□□□ -0.45
SS18-222ENST00000582792 NPHS1O60500 1241 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 ABCB7O75027 752 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 GUCY1B2O75343 617 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 ALDH3A1P30838 453 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 ARL1P40616 181 aaPredicted RBP12.25□□□□□ -0.45
SS18-222ENST00000582792 EMDP50402 254 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 DUSP2Q05923 314 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 TRMT12Q53H54 448 aaKnown RBP12.25□□□□□ -0.45
SS18-222ENST00000582792 CFAP157Q5JU67 520 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 FRMD7Q6ZUT3 714 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 GBP7Q8N8V2 638 aaPredicted RBP12.25□□□□□ -0.45
SS18-222ENST00000582792 OR52B6Q8NGF0 335 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 TMBIM1Q969X1 311 aa12.25□□□□□ -0.45
SS18-222ENST00000582792 ARL8AQ96BM9 186 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms