RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 IGHV4-39P01824 125 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 BPGMP07738 259 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C1GALT1C1LP0DN25 315 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ALOX15P16050 662 aaPredicted RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF708P17019 499 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NAGAP17050 411 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CD22P20273 847 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 IMPDH1P20839 514 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GALNSP34059 522 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KIR2DL2P43627 348 aaPredicted RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CLDN18P56856 261 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NRG3P56975 720 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FBXW4P57775 412 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DNAJB13P59910 316 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HERVK_113P63132 956 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ERVK-8P63133 956 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PCDH1Q08174 1060 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TRAF3Q13114 568 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CHIT1Q13231 466 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SNTA1Q13424 505 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GTF2H2Q13888 395 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLBPQ14493 270 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GUSBP1Q15486 140 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NRF1Q16656 503 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LIPMQ5VYY2 423 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 BICRALQ6AI39 1079 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC30A6Q6NXT4 461 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GTF2H2CQ6P1K8 395 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ANGPTL8Q6UXH0 198 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLCO4C1Q6ZQN7 724 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C22orf34Q6ZV56 151 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 P4HA3Q7Z4N8 544 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 IFNEQ86WN2 208 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC22A9Q8IVM8 553 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TRIM42Q8IWZ5 723 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KRT78Q8N1N4 520 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CCNYL1Q8N7R7 359 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CNEP1R1Q8N9A8 125 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR52B6Q8NGF0 335 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CCT6BQ92526 530 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 AKAP1Q92667 903 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FBXW5Q969U6 566 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 L3HYPDHQ96EM0 354 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 RBM18Q96H35 190 aaKnown RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF845Q96IR2 970 aaPredicted RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HS6ST2Q96MM7 605 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PAIP2Q9BPZ3 127 aaKnown RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 RHNO1Q9BSD3 238 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TBCDQ9BTW9 1192 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C1QTNF3Q9BXJ4 246 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ERVK-6Q9BXR3 956 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OPN3Q9H1Y3 402 aaPredicted RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 EHD1Q9H4M9 534 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NOL11Q9H8H0 719 aaKnown RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FANCFQ9NPI8 374 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PRDM7Q9NQW5 492 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OXSMQ9NWU1 459 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MS4A12Q9NXJ0 267 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 NKIRAS1Q9NYS0 192 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GPRC5BQ9NZH0 403 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ERVK-19Q9WJR5 959 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZNF175Q9Y473 711 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ANGPTL3Q9Y5C1 460 aa6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TNPO3Q9Y5L0 923 aaKnown RBP6.46□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DYNC2H1Q8NCM8 4307 aaKnown RBP6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 LOC100653049A0A140TA62 436 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C2orf92A0A1B0GVN3 265 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ANKDD1BA6NHY2 528 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ELOA3DA6NLF2 546 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HRKO00198 91 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 UBFD1O14562 309 aaKnown RBP6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GNB5O14775 395 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CLGNO14967 610 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TRIM13O60858 407 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CBR3O75828 277 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KRT34O76011 436 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SOD3P08294 240 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CHN1P15882 459 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 EPB42P16452 691 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HNF1AP20823 631 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 BGNP21810 368 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HIST1H1TP22492 207 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ATP5A1P25705 553 aaKnown RBP6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SRD5A2P31213 254 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ARRB2P32121 409 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KCNJ5P48544 419 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC18A1P54219 525 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DSCR9P59020 149 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ID2Q02363 134 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 IRF8Q02556 426 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SRYQ05066 204 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CLCQ05315 142 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DOC2AQ14183 400 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ELOA3BQ3SY89 546 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TMEM35AQ53FP2 167 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HSP90B2PQ58FF3 399 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HHATQ5VTY9 493 aa6.45□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ADNP2Q6IQ32 1131 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms