RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 GNB5O14775 395 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SPINT2O43291 252 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 B4GAT1O43505 415 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 IDH3BO43837 385 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SCELO95171 688 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 OAZ2O95190 189 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 HMGN1P05114 100 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 LCKP06239 509 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 GSTT2P0CG29 244 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 GSTT2BP0CG30 244 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SPATA31C1P0DKV0 1188 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 MYL2P10916 166 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PSKH1P11801 424 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PRPS1L1P21108 318 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 BGNP21810 368 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ITPKBP27987 946 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SRD5A2P31213 254 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 CNR2P34972 360 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 APOBEC1P41238 236 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PPP3CCP48454 512 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 HMGCS2P54868 508 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 RAB10P61026 200 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 OSTNP61366 133 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 VSNL1P62760 191 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SP3Q02447 781 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 CYP24A1Q07973 514 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 MRPL23Q16540 153 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF699Q32M78 642 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PAN3Q58A45 887 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 KIAA1755Q5JYT7 1200 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 MARCH8Q5T0T0 291 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 FRG2Q64ET8 278 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 RTL6Q6ICC9 239 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ADAM5Q6NVV9 412 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 CDC42EP5Q6NZY7 148 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 RTL4Q6ZR62 310 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 HDDC2Q7Z4H3 204 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ACOT1Q86TX2 421 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF546Q86UE3 836 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 RANBP3LQ86VV4 465 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 RNF130Q86XS8 419 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 MARCH9Q86YJ5 346 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 GPSM1Q86YR5 675 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 CRLF3Q8IUI8 442 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PARP8Q8N3A8 854 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 LINC01465Q8N7H1 131 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 TTC29Q8NA56 475 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 INO80EQ8NBZ0 244 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 NOA1Q8NC60 698 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PPFIBP2Q8ND30 876 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF548Q8NEK5 533 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 NFAM1Q8NET5 270 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 OR1F12Q8NHA8 337 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 CPNE4Q96A23 557 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 FKBP10Q96AY3 582 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 TEPSINQ96N21 525 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC38A2Q96QD8 506 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 APOL2Q9BQE5 337 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 SH2D3AQ9BRG2 576 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 OR51B6Q9H340 312 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ATP13A3Q9H7F0 1226 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 C12orf10Q9HB07 376 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 ABCB10Q9NRK6 738 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 NDE1Q9NXR1 346 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 MYEF2Q9P2K5 600 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 LRWD1Q9UFC0 647 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 DAPK2Q9UIK4 370 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 IKZF3Q9UKT9 509 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 NR2E1Q9Y466 385 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 LOXL2Q9Y4K0 774 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 YIPF1Q9Y548 306 aa4.58□□□□□ -1.68
TOPBP1-210ENST00000572787 PTPRUQ92729 1446 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 A0A1W2PRD5 423 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 HYKKA2RU49 373 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 YJEFN3A6XGL0 299 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NPIPA7E9PJI5 369 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 E9PQ18 207 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 POC1B-GALNT4F8VUJ3 575 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SMLR1H3BR10 107 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CLIC1O00299 241 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 DVL1O14640 695 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 HUS1O60921 280 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 SH3BGRLO75368 114 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 HPRP00739 348 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 VTNP04004 478 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 FABP1P07148 127 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 MMP3P08254 477 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 NPIPA8P0DM63 369 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CALM1P0DP23 149 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CALM2P0DP24 149 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CALM3P0DP25 149 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 IDO1P14902 403 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CYP11B1P15538 503 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 PPP3CBP16298 524 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CTRB1P17538 263 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 HSD11B1P28845 292 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CD1CP29017 333 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 TACR3P29371 465 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 UGT2B10P36537 528 aa4.57□□□□□ -1.68
TOPBP1-210ENST00000572787 CFHR2P36980 270 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms