RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZBED6CLQ96FA7 236 aaPredicted RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 ZBTB26Q9HCK0 441 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 GLRX2Q9NS18 164 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 PAQR5Q9NXK6 330 aaPredicted RBP16.62■□□□□ 0.25
TPM1-226ENST00000560959 STOML1Q9UBI4 398 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 ABCG2Q9UNQ0 655 aa16.62■□□□□ 0.25
TPM1-226ENST00000560959 CCDC188H7C350 402 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 PHF1O43189 567 aaPredicted RBP16.61■□□□□ 0.25
TPM1-226ENST00000560959 SEC14L5O43304 696 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 SS18L1O75177 396 aaPredicted RBP16.61■□□□□ 0.25
TPM1-226ENST00000560959 CCNG1P51959 295 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 CLDN20P56880 219 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 CORO7P57737 925 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 GALNT1Q10472 559 aaPredicted RBP16.61■□□□□ 0.25
TPM1-226ENST00000560959 SGCBQ16585 318 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 ERCC6LQ2NKX8 1250 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 GGTA1PQ4G0N0 100 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 TTC19Q6DKK2 380 aaPredicted RBP16.61■□□□□ 0.25
TPM1-226ENST00000560959 NPSR1Q6W5P4 371 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 EXOC3L1Q86VI1 746 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 OR52B6Q8NGF0 335 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 LILRB1Q8NHL6 650 aaPredicted RBP16.61■□□□□ 0.25
TPM1-226ENST00000560959 FBXW5Q969U6 566 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 CDK15Q96Q40 435 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 HDHD5Q9BXW7 423 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 ACTR6Q9GZN1 396 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 SLCO5A1Q9H2Y9 848 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 BRF2Q9HAW0 419 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 MED11Q9P086 117 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 SNX24Q9Y343 169 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 ANK2Q01484 3957 aa16.61■□□□□ 0.25
TPM1-226ENST00000560959 H3BML4 177 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 FADS1O60427 444 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 PLOD3O60568 738 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 KLHL2O95198 593 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 SIX3O95343 332 aaPredicted RBP16.6■□□□□ 0.25
TPM1-226ENST00000560959 C2P06681 752 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 CTBP2P56545 445 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 NAB1Q13506 487 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.6■□□□□ 0.25
TPM1-226ENST00000560959 KLC3Q6P597 504 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 WFDC8Q8IUA0 241 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 CREG2Q8IUH2 290 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 CCDC116Q8IYX3 515 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 PPM1NQ8N819 430 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 UHMK1Q8TAS1 419 aaKnown RBP16.6■□□□□ 0.25
TPM1-226ENST00000560959 SMAP2Q8WU79 429 aaPredicted RBP16.6■□□□□ 0.25
TPM1-226ENST00000560959 GTPBP3Q969Y2 492 aaKnown RBP16.6■□□□□ 0.25
TPM1-226ENST00000560959 C1GALT1C1Q96EU7 318 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 GRIP2Q9C0E4 1043 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 FOLH1BQ9HBA9 442 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 LRTM1Q9HBL6 345 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 NMRK1Q9NWW6 199 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 TAS2R9Q9NYW1 312 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 CDC42EP3Q9UKI2 254 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 UTS2RQ9UKP6 389 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 SNX8Q9Y5X2 465 aa16.6■□□□□ 0.25
TPM1-226ENST00000560959 UQCRHLA0A096LP55 91 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 PLGP00747 810 aaPredicted RBP16.59■□□□□ 0.25
TPM1-226ENST00000560959 SOD3P08294 240 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 THBS2P35442 1172 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 ACVR1BP36896 505 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
TPM1-226ENST00000560959 TMEM44Q2T9K0 475 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 CYP27C1Q4G0S4 372 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 STK32CQ86UX6 486 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 SLC44A2Q8IWA5 706 aaPredicted RBP16.59■□□□□ 0.25
TPM1-226ENST00000560959 STEAP2Q8NFT2 490 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 EFHD2Q96C19 240 aaPredicted RBP16.59■□□□□ 0.25
TPM1-226ENST00000560959 GPR78Q96P69 363 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 TACO1Q9BSH4 297 aaKnown RBP16.59■□□□□ 0.25
TPM1-226ENST00000560959 PRRG4Q9BZD6 226 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 ELOVL6Q9H5J4 265 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 BARX1Q9HBU1 254 aaPredicted RBP16.59■□□□□ 0.25
TPM1-226ENST00000560959 NGBQ9NPG2 151 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 TMEM160Q9NX00 188 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 SLC12A4Q9UP95 1085 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 LIPT1Q9Y234 373 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 RNF115Q9Y4L5 304 aa16.59■□□□□ 0.25
TPM1-226ENST00000560959 C17orf51A8MQB3 221 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 FESP07332 822 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 ALDH9A1P49189 494 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 CLK3P49761 638 aaKnown RBP16.58■□□□□ 0.24
TPM1-226ENST00000560959 IRF9Q00978 393 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 TRAF3Q13114 568 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 CALCOCO2Q13137 446 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 NCMAPQ5T1S8 102 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 FAM180BQ6P0A1 224 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 GGNQ86UU5 652 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 OR4N2Q8NGD1 307 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 RAB3IL1Q8TBN0 382 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 C11orf24Q96F05 449 aaPredicted RBP16.58■□□□□ 0.24
TPM1-226ENST00000560959 USB1Q9BQ65 265 aaKnown RBP16.58■□□□□ 0.24
TPM1-226ENST00000560959 ESRP2Q9H6T0 727 aaKnown RBP16.58■□□□□ 0.24
TPM1-226ENST00000560959 ANKRA2Q9H9E1 313 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 TMCO1Q9UM00 188 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 OR10H1Q9Y4A9 318 aa16.58■□□□□ 0.24
TPM1-226ENST00000560959 IGLV3-32A0A0A0MS00 114 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 STX16-NPEPL1H3BU86 382 aa16.57■□□□□ 0.24
TPM1-226ENST00000560959 STX16O14662 325 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms