RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 LCA5Q86VQ0 697 aa18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 TGIF2LYQ8IUE0 185 aa18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 SAMD14Q8IZD0 417 aaPredicted RBP18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 CEP112Q8N8E3 955 aa18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 YIPF4Q9BSR8 244 aa18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 MIEF1Q9NQG6 463 aa18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 STK38LQ9Y2H1 464 aa18.55■□□□□ 0.56
TSPAN3-206ENST00000559373 A0A1W2PPR1 153 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 CCDC151A5D8V7 595 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 SHISA8B8ZZ34 492 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 UPK1AO00322 258 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 SMNDC1O75940 238 aaKnown RBP eCLIP18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 ZNF708P17019 499 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 HK1P19367 917 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 FOXD4Q12950 439 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 NOXRED1Q6NXP6 359 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 FRMD7Q6ZUT3 714 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 ZNF551Q7Z340 670 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 P4HA3Q7Z4N8 544 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 GALNT10Q86SR1 603 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 MARCH3Q86UD3 253 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 CCDC63Q8NA47 563 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 OR2M3Q8NG83 312 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 KIF18AQ8NI77 898 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 RNF138Q8WVD3 245 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 WNT2BQ93097 391 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 ERP27Q96DN0 273 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 SFXN3Q9BWM7 321 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 GSX1Q9H4S2 264 aaPredicted RBP18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 EQTNQ9NQ60 294 aa18.54■□□□□ 0.56
TSPAN3-206ENST00000559373 GXYLT2A0PJZ3 443 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 SEC14L5O43304 696 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 GLRA3O75311 464 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 SUCLG1P53597 346 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 PPP2R2AP63151 447 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 CFAP157Q5JU67 520 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 RAET1LQ5VY80 246 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 VWA1Q6PCB0 445 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 PAMR1Q6UXH9 720 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 CNEP1R1Q8N9A8 125 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 DUSP19Q8WTR2 217 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 UBLCP1Q8WVY7 318 aaPredicted RBP18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 SMPDL3BQ92485 455 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 CIDECQ96AQ7 238 aaPredicted RBP18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 AMDHD1Q96NU7 426 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 PLEKHF2Q9H8W4 249 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 MYNNQ9NPC7 610 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 DDX18Q9NVP1 670 aaKnown RBP18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 C19orf53Q9UNZ5 99 aaPredicted RBP18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 ZNF337Q9Y3M9 751 aa18.53■□□□□ 0.56
TSPAN3-206ENST00000559373 FREM1Q5H8C1 2179 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 A0A1W2PNV4 684 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SERTM1A2A2V5 107 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SH3D21A4FU49 640 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 H3BML4 177 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 FADS1O60427 444 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 COQ9O75208 318 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SEC22BO75396 215 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 TNFSF13O75888 250 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 EFNA1P20827 205 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 CHMP24386 653 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 NTSP30990 170 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 DSCR4P56555 118 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 CLDN15P56746 228 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SIRPAP78324 504 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SORDQ00796 357 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 FAM27E3Q08E93 113 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 HSPB3Q12988 150 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 KEAP1Q14145 624 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SH2D5Q6ZV89 423 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 EXOC3L1Q86VI1 746 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 FADS6Q8N9I5 356 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 CHDHQ8NE62 594 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 FIG4Q92562 907 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 PIK3R3Q92569 461 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 ELP4Q96EB1 424 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 SIRT5Q9NXA8 310 aa18.52■□□□□ 0.56
TSPAN3-206ENST00000559373 A0A087WV62 115 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 A8MXE2 369 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 AKAP10O43572 662 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 PLIN3O60664 434 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 RAF1P04049 648 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 GABRA3P34903 492 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 ADAM8P78325 824 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 CHMP1BQ7LBR1 199 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 TRIM46Q7Z4K8 759 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 CLHC1Q8NHS4 586 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 FBXO30Q8TB52 745 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 EPS8L3Q8TE67 593 aaKnown RBP18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 CCDC126Q96EE4 140 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 ZNF845Q96IR2 970 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 ZFP3Q96NJ6 502 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 UCN2Q96RP3 112 aa18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 STMN4Q9H169 189 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 OPN3Q9H1Y3 402 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 C6orf203Q9P0P8 240 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 MRPS18CQ9Y3D5 142 aaKnown RBP18.51■□□□□ 0.55
TSPAN3-206ENST00000559373 SLC22A20A6NK97 555 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms