RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 GPR55Q9Y2T6 319 aaPredicted RBP9.4□□□□□ -0.9
EFCAB11-209ENST00000556005 IGHV1OR21-1A0A087WYE8 117 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 CPSF4LA6NMK7 179 aaKnown RBP9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 DUX1O43812 170 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 INMTO95050 263 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 NKX2-2O95096 273 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 CBX7O95931 251 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 MT-ND2P03891 347 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 CCNA2P20248 432 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 MMP11P24347 488 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 HOXA6P31267 233 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 FNTBP49356 437 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 HSD17B7P56937 341 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 OR1D5P58170 312 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 GPLD1P80108 840 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 HSD11B2P80365 405 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 IGLV3-21P80748 117 aaPredicted RBP9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 MAT1AQ00266 395 aaKnown RBP9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 ZNF155Q12901 538 aaPredicted RBP9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 BNIP3Q12983 259 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 ENTPD8Q5MY95 495 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 CASP12Q6UXS9 341 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 ZNF836Q6ZNA1 936 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 DGAT2L6Q6ZPD8 337 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 ZER1Q7Z7L7 766 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 SLC25A45Q8N413 288 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 TOR1AIP2Q8NFQ8 470 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 OR51Q1Q8NH59 317 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 Q96MT0 163 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 ZNF578Q96N58 590 aaPredicted RBP9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 DGAT2Q96PD7 388 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 MCHR1Q99705 422 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 RBCK1Q9BYM8 510 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 SPRTNQ9H040 489 aaPredicted RBP9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 ACOT13Q9NPJ3 140 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 PRDM6Q9NQX0 595 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 CLN6Q9NWW5 311 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 USP34Q70CQ2 3546 aa9.4□□□□□ -0.91
EFCAB11-209ENST00000556005 SPAG17Q6Q759 2223 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 A0A087WUU8 490 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 ZNF749O43361 778 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 FRS3O43559 492 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 HRO43593 1189 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 KIAA0513O60268 411 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 BRINP1O60477 761 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 CDC123O75794 336 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 OR2B3O76000 313 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 OR5F1O95221 314 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 ATE1O95260 518 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 SOX14O95416 240 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 NID1P14543 1247 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 S1PR1P21453 382 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 RPS4Y1P22090 263 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 CD1CP29017 333 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 TRHRP34981 398 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 ST13P50502 369 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 GP2P55259 537 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 EEF1A1P68104 462 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 SYT16Q17RD7 645 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 SYT6Q5T7P8 510 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 SLX4IPQ5VYV7 408 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 LYSMD4Q5XG99 296 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 AP1ARQ63HQ0 302 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 CWF19L1Q69YN2 538 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 ZNF730Q6ZMV8 503 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 CCDC81Q6ZN84 652 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 RANBP3LQ86VV4 465 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 SLC35F3Q8IY50 421 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 NLGN4XQ8N0W4 816 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 GNPDA2Q8TDQ7 276 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 FCGR1BQ92637 280 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 DIO2Q92813 273 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 GGHQ92820 318 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 HOXB13Q92826 284 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 ELF4Q99607 663 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 RHNO1Q9BSD3 238 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 LMF2Q9BU23 707 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 FUNDC2Q9BWH2 189 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 POLR2J2Q9GZM3 115 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 TIMMDC1Q9NPL8 285 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 SEMA4GQ9NTN9 838 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 FKBP14Q9NWM8 211 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 NDOR1Q9UHB4 597 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 CEP192Q8TEP8 1941 aa9.39□□□□□ -0.91
EFCAB11-209ENST00000556005 TRIM64BA6NI03 449 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 PRAMEF2O60811 474 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 FADS2O95864 444 aaKnown RBP9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 CDK1P06493 297 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 GUSBP08236 651 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 TNNI3P19429 210 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 MAP2K4P45985 399 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 STT3AP46977 705 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 DHPSP49366 369 aaPredicted RBP9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 SEPHS1P49903 392 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 SNRPGP62308 76 aaKnown RBP9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 SERTAD2Q14140 314 aa9.38□□□□□ -0.91
EFCAB11-209ENST00000556005 ERV3-1Q14264 604 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms