RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ACTRT3Q9BYD9 372 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 KLHL31Q9H511 634 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 RMI1Q9H9A7 625 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CNIH4Q9P003 139 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 H2AFY2Q9P0M6 372 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 PLEKHB1Q9UF11 243 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 MOSPD1Q9UJG1 213 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ADAM30Q9UKF2 790 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ZNF232Q9UNY5 417 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ATG4BQ9Y4P1 393 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ASB4Q9Y574 426 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 COL4A3Q01955 1670 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MDC1Q14676 2089 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 TRDV1A0A1B0GX56 115 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OTOL1A6NHN0 477 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 POLR1CO15160 346 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 PPM1DO15297 605 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MID1O15344 667 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 HCN1O60741 890 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 EPPINO95925 133 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 HMGN1P05114 100 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CLEC2LP0C7M8 214 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 C8orf89P0DMQ9 161 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SLC2A2P11168 524 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 F3P13726 295 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 GNSP15586 552 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 TCEA1P23193 301 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 MYL9P24844 172 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 PTBP1P26599 531 aaKnown RBP eCLIP6.56□□□□□ -1.365e-6■■□□□ 13.3
TDP1-213ENST00000555880 PTGER1P34995 402 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SLC1A3P43003 542 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CHRNEQ04844 493 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 LRRC32Q14392 662 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 AGERQ15109 404 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CST6Q15828 149 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 DECR1Q16698 335 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 GAB4Q2WGN9 574 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 FAM214AQ32MH5 1076 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SLC35F1Q5T1Q4 408 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 AGBL4Q5VU57 503 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 METAP1DQ6UB28 335 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 NRROSQ86YC3 692 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SFTPA1Q8IWL2 248 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SAMD14Q8IZD0 417 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 VWA5B2Q8N398 1253 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 PSD4Q8NDX1 1056 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OR2L3Q8NG85 312 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OR52E1Q8NGJ3 308 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OR9A2Q8NGT5 310 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 OR52P1PQ8NH57 321 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 FAM174AQ8TBP5 190 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ADAMTS15Q8TE58 950 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ACOT11Q8WXI4 607 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 ELP4Q96EB1 424 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 CHFRQ96EP1 664 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 C16orf58Q96GQ5 468 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 FRMD6Q96NE9 622 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ASB16Q96NS5 453 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 ARHGAP9Q9BRR9 750 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 C1QTNF7Q9BXJ2 289 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 MCOLN1Q9GZU1 580 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 QRSL1Q9H0R6 528 aaKnown RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 MIXL1Q9H2W2 232 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SEMA4GQ9NTN9 838 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 NLGN3Q9NZ94 848 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 THAP10Q9P2Z0 257 aaPredicted RBP6.56□□□□□ -1.36
TDP1-213ENST00000555880 COMMD3Q9UBI1 195 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 KCNK6Q9Y257 313 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 N6AMT1Q9Y5N5 214 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 HEBP2Q9Y5Z4 205 aa6.56□□□□□ -1.36
TDP1-213ENST00000555880 SNRNP200O75643 2136 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 LINC01553A4QN01 128 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 TTC36A6NLP5 189 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 WASHC1A8K0Z3 465 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 SURF4O15260 269 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 WIPF1O43516 503 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 FRS3O43559 492 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 OR5F1O95221 314 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 ASGR2P07307 311 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 CSF3P09919 207 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 LIMS3P0CW19 117 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 LIMS4P0CW20 117 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 PRKAR1AP10644 381 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 C5AR1P21730 350 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 RCVRNP35243 200 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 DRD3P35462 400 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 TRIM23P36406 574 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 GAS1P54826 345 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 RAB8AP61006 207 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 RPS21P63220 83 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 FABP5Q01469 135 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MLLT1Q03111 559 aaPredicted RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 RGS1Q08116 209 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 PGGHGQ32M88 737 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 ZNF750Q32MQ0 723 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 UAP1L1Q3KQV9 507 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 EIPR1Q53HC9 387 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 ZNF628Q5EBL2 1059 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms