RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 GNA13Q14344 377 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 ARHGAP11BQ3KRB8 267 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 SLC22A10Q63ZE4 541 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 SLC25A25Q6KCM7 469 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 HEPHL1Q6MZM0 1159 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 NANOGP8Q6NSW7 305 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 FIGNL1Q6PIW4 674 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 PCSK4Q6UW60 755 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 Q6ZS92 163 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 ZNF227Q86WZ6 799 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 RBMXL3Q8N7X1 1067 aaKnown RBP13.14□□□□□ -0.31
CHD8-208ENST00000555301 TMEM178AQ8NBL3 297 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 CATSPER1Q8NEC5 780 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 OR10G3Q8NGC4 313 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 PAQR8Q8TEZ7 354 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 RAB8BQ92930 207 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 EFHD2Q96C19 240 aaPredicted RBP13.14□□□□□ -0.31
CHD8-208ENST00000555301 NSL1Q96IY1 281 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 SLC39A3Q9BRY0 314 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 NANOGQ9H9S0 305 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 SH2D2AQ9NP31 389 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 CNIH4Q9P003 139 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 P2RX2Q9UBL9 471 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 B3GNT3Q9Y2A9 372 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 AP3M1Q9Y2T2 418 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
CHD8-208ENST00000555301 ATXN7O15265 892 aaPredicted RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 STX11O75558 287 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 CBX6O95503 412 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 P04436 131 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 SP1P08047 785 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 GUSBP08236 651 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 CPA2P48052 419 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 CD97P48960 835 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 HPCAP84074 193 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 LY6DQ14210 128 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 ZNF169Q14929 603 aaPredicted RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 ZNF766Q5HY98 468 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 TBCELQ5QJ74 424 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 CCNJQ5T5M9 372 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 TMEM81Q6P7N7 255 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 METTL25Q8N6Q8 603 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 TEX19Q8NA77 164 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 PSD4Q8NDX1 1056 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 OR5M3Q8NGP4 307 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 SPPL2AQ8TCT8 520 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 HGDQ93099 445 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 SCMH1Q96GD3 660 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 TRNT1Q96Q11 434 aaKnown RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 SDF2Q99470 211 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 GPATCH1Q9BRR8 931 aaKnown RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 HOXD1Q9GZZ0 328 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 IKZF5Q9H5V7 419 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 KAT8Q9H7Z6 458 aaKnown RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 POLE3Q9NRF9 147 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 SACM1LQ9NTJ5 587 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 CALML5Q9NZT1 146 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 CSAG2Q9Y5P2 127 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 CHCHD2Q9Y6H1 151 aaPredicted RBP13.13□□□□□ -0.31
CHD8-208ENST00000555301 USP24Q9UPU5 2620 aa13.13□□□□□ -0.31
CHD8-208ENST00000555301 ANKRD33BA6NCL7 494 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 CCT8L1PA6NM43 557 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 TNFRSF21O75509 655 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 NR2F1P10589 423 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 CYP4B1P13584 511 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 SLC6A2P23975 617 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 CLK3P49761 638 aaKnown RBP13.12□□□□□ -0.31
CHD8-208ENST00000555301 KLRB1Q12918 225 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 SNTA1Q13424 505 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 GCNT6Q5T4J0 391 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 C8orf82Q6P1X6 216 aaPredicted RBP13.12□□□□□ -0.31
CHD8-208ENST00000555301 SERPINA11Q86U17 422 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 FBXW8Q8N3Y1 598 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 ECSITQ9BQ95 431 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 SPATA9Q9BWV2 254 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 TMEM38AQ9H6F2 299 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 METTL7AQ9H8H3 244 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 A4GALTQ9NPC4 353 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 ABCG2Q9UNQ0 655 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 L3MBTL1Q9Y468 752 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 CROCCQ5TZA2 2017 aa13.12□□□□□ -0.31
CHD8-208ENST00000555301 KLRC4-KLRK1H3BQV0 150 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 SLC28A2O43868 658 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 NME2P1O60361 137 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 UTS2O95399 124 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 NGFRP08138 427 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 TFPTP0C1Z6 253 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 CCL3P10147 92 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 HPGDP15428 266 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 CNR1P21554 472 aa13.11□□□□□ -0.31
CHD8-208ENST00000555301 NME2P22392 152 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms