RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TMEM129A0AVI4 362 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SHISA3A0PJX4 238 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 PRAMEF25A6NGN4 478 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 HTR3BO95264 441 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SIX6O95475 246 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 S100A8P05109 93 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 C1SP09871 688 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 LAMP1P11279 417 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 GABRA1P14867 456 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 CHI3L1P36222 383 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 XCR1P46094 333 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 ILKQ13418 452 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 SLC16A13Q7RTY0 426 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 WDR53Q7Z5U6 358 aaPredicted RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 C12orf40Q86WS4 652 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 CMIPQ8IY22 773 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 OR5M9Q8NGP3 310 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 CSGALNACT1Q8TDX6 532 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 OR51M1Q9H341 326 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 NMRK2Q9NPI5 230 aa14.73□□□□□ -0.05
SYNE3-203ENST00000554873 MYEF2Q9P2K5 600 aaKnown RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 TESQ9UGI8 421 aaKnown RBP14.73□□□□□ -0.05
SYNE3-203ENST00000554873 AGAP14A8MT82 685 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ATG12O94817 140 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 PPP3CBP16298 524 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 S100PP25815 95 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 CCR6P51684 374 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 VRK3Q8IV63 474 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 CBARPQ8N350 705 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ASB11Q8WXH4 323 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 OVCA2Q8WZ82 227 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 SCN8AQ9UQD0 1980 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ACPPP15309 386 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 OR1D2P34982 312 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 CHIT1Q13231 466 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF124Q15973 351 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 CST9Q5W186 159 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF770Q6IQ21 691 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-203ENST00000554873 DEF8Q6ZN54 512 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 RFLNAQ6ZTI6 216 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 TPGS1Q6ZTW0 290 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 OAFQ86UD1 273 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ARIH2OSQ8N7S6 290 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 OR8J2Q8NGG1 315 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 GLYATL2Q8WU03 294 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 NARS2Q96I59 477 aaKnown RBP14.72□□□□□ -0.05
SYNE3-203ENST00000554873 LCORQ96JN0 433 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-203ENST00000554873 SYT17Q9BSW7 474 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ATG10Q9H0Y0 220 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 SDHAF3Q9NRP4 125 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF275Q9NSD4 429 aaPredicted RBP14.72□□□□□ -0.05
SYNE3-203ENST00000554873 ZDHHC3Q9NYG2 299 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 RPS6KB2Q9UBS0 482 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 MRTO4Q9UKD2 239 aaKnown RBP14.72□□□□□ -0.05
SYNE3-203ENST00000554873 CORO2BQ9UQ03 480 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 PCDHB7Q9Y5E2 793 aa14.72□□□□□ -0.05
SYNE3-203ENST00000554873 NPIPB15A6NHN6 443 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CHURC1-FNTBB4DL54 471 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 SUSD5O60279 629 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 ADAP00813 363 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 HLA-DPB1P04440 258 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 KCNJ3P48549 501 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 RAB8AP61006 207 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 WDR5P61964 334 aaKnown RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 ATP13A5Q4VNC0 1218 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 PYHIN1Q6K0P9 492 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 TMEM17Q86X19 198 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 SIAH3Q8IW03 269 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 SLITRK4Q8IW52 837 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 C19orf43Q9BQ61 176 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 DDX31Q9H8H2 851 aaKnown RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 NIT2Q9NQR4 276 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 FAM120CQ9NX05 1096 aaKnown RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 ZSCAN32Q9NX65 697 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CBLCQ9ULV8 474 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 SLC22A7Q9Y694 548 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 SULT1C2O00338 296 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 GIPP09681 153 aaPredicted RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 ACADLP28330 430 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CD96P40200 585 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CCDC157Q569K6 752 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 IDNKQ5T6J7 187 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CRTC1Q6UUV9 634 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 KRT78Q8N1N4 520 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 DMBX1Q8NFW5 382 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 HUS1BQ8NHY5 278 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CMSS1Q9BQ75 279 aaKnown RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 C7orf50Q9BRJ6 194 aaKnown RBP14.71□□□□□ -0.05
SYNE3-203ENST00000554873 BEX1Q9HBH7 125 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 PIPOXQ9P0Z9 390 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 MKL2Q9ULH7 1088 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 CA5BQ9Y2D0 317 aa14.71□□□□□ -0.05
SYNE3-203ENST00000554873 ALPK3Q96L96 1907 aa14.71□□□□□ -0.06
SYNE3-203ENST00000554873 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SERTM1A2A2V5 107 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PRMT3O60678 531 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PEX14O75381 377 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SOX30O94993 753 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SOX14O95416 240 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 EIF4EP06730 217 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms