RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 HAT1O14929 419 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CASKO14936 926 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 PSTPIP1O43586 416 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 HCN1O60741 890 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 B4GALT2O60909 372 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 DNAJB6O75190 326 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 RDH16O75452 317 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CDC123O75794 336 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ZFAND5O76080 213 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 GLSO94925 669 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 GAS8O95995 478 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SERPINC1P01008 464 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ALDOAP04075 364 aaKnown RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TPM3P06753 285 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 IL1RNP18510 177 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CNR1P21554 472 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 RPS3P23396 243 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 JAK1P23458 1154 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CEACAM8P31997 349 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 PCP4P48539 62 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TTPAP49638 278 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SSR4P51571 173 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 EIF3EP60228 445 aaKnown RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 RPS15AP62244 130 aaKnown RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SKP1P63208 163 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 LARS2Q15031 903 aaKnown RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 HERC3Q15034 1050 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 HYAL4Q2M3T9 481 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TYSND1Q2T9J0 566 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ASTE1Q2TB18 679 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ATG16L1Q676U5 607 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 NIPAL1Q6NVV3 410 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF788Q6ZQV5 615 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF534Q76KX8 674 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 PRSS41Q7RTY9 318 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 MAATS1Q7Z4T9 603 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 VN1R4Q7Z5H5 301 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 YTHDF3Q7Z739 585 aaKnown RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 AMIGO2Q86SJ2 522 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 LINC00523Q86TU6 105 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 LRRC6Q86X45 466 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CCDC50Q8IVM0 306 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 KATNAL2Q8IYT4 538 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TMEM251Q8N6I4 163 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 B3GNT7Q8NFL0 401 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 OR2M7Q8NG81 312 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 OR13J1Q8NGT2 312 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 ACTL9Q8TC94 416 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SLC13A3Q8WWT9 602 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 DPF1Q92782 380 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SLCO2A1Q92959 643 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TM4SF19Q96DZ7 209 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 DACH2Q96NX9 599 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 PKP4Q99569 1192 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 HEMGNQ9BXL5 484 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TTTY12Q9BZ98 90 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 TSPY26PQ9H489 355 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 CLK4Q9HAZ1 481 aaKnown RBP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 IL1RL2Q9HB29 575 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 FAM114A2Q9NRY5 505 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 DEPPQ9NTK1 212 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 HPF1Q9NWY4 346 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SH3BP4Q9P0V3 963 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 FBXW2Q9UKT8 454 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-228ENST00000554592 NAALAD2Q9Y3Q0 740 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 HYOU1Q9Y4L1 999 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 GTF3C1Q12789 2109 aa4.45□□□□□ -1.7
ATXN3-228ENST00000554592 AKAP6Q13023 2319 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 TRGV5A0A0B4J1U4 118 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 TRBV11-1A0A0K0K1C0 115 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 ATP6AP2A0A1C7CYW4 349 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SYCE3A1L190 88 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 KRT87PA6NCN2 255 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 TRIM64A6NGJ6 449 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 TRIM64BA6NI03 449 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SAC3D1A6NKF1 404 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 A6NLC8 198 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SLC16A5O15375 505 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 CHST10O43529 356 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 PSIP1O75475 530 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 NDUFS3O75489 264 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 ATP6AP2O75787 350 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 JTBO76095 146 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 METTL18O95568 372 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SLC16A8O95907 504 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 EPPINO95925 133 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 STATHP02808 62 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 CATP04040 527 aaKnown RBP4.44□□□□□ -1.7
ATXN3-228ENST00000554592 LYL1P12980 280 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 ATP5DP30049 168 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 TIMP3P35625 211 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 MAGEA5P43359 124 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SLC37A1P57057 533 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 VAMP2P63027 116 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 PRAMEP78395 509 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 SORDQ00796 357 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 ACVR1Q04771 509 aa4.44□□□□□ -1.7
ATXN3-228ENST00000554592 CDH17Q12864 832 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms