RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 BLACEA4D250 179 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 FITM1A5D6W6 292 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 AGAP5A6NIR3 686 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 CLDN24A6NM45 220 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 CLCA1A8K7I4 914 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 RHPN2P1A8MT19 583 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 STK25O00506 426 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 AP3D1O14617 1153 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 BCAT2O15382 392 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 OR10H2O60403 315 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 MPZL2O60487 215 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 STX11O75558 287 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 CYP7B1O75881 506 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 OR5F1O95221 314 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 ZBTB11O95625 1053 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 AK1P00568 194 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 THY1P04216 161 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 LCKP06239 509 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 CCNYL3P0C7X3 344 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 POU1F1P28069 291 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 RGS19P49795 217 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 SKP1P63208 163 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 POU6F2P78424 691 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 HOXC5Q00444 222 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 BNC1Q01954 994 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 PLAURQ03405 335 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 NFATC3Q12968 1075 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 BNIP3Q12983 259 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 TARDBPQ13148 414 aaKnown RBP eCLIP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 DYNC1I2Q13409 638 aaKnown RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 IRF3Q14653 427 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 SHBQ15464 509 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 GPR68Q15743 365 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 TBCEQ15813 527 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 EIPR1Q53HC9 387 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 ENTPD8Q5MY95 495 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 TMEM201Q5SNT2 666 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 UBE2UQ5VVX9 321 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 NIPAL1Q6NVV3 410 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 KIF18BQ86Y91 864 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 GALNT12Q8IXK2 581 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 SLC35F3Q8IY50 421 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 PEX5LQ8IYB4 626 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF595Q8IYB9 648 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 GNPDA2Q8TDQ7 276 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 SLC38A4Q969I6 547 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 GPN2Q9H9Y4 310 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 FOLH1BQ9HBA9 442 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 PDE7BQ9NP56 450 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 AMBNQ9NP70 447 aa10.71□□□□□ -0.69
RAB5C-208ENST00000551338 WARS2Q9UGM6 360 aaKnown RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 TMEM184BQ9Y519 407 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-208ENST00000551338 IGHV1OR21-1A0A087WYE8 117 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 SH3D21A4FU49 640 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 H3BMH7 237 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 H3BN98 237 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 HYAL3O43820 417 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 PIP5K1CO60331 668 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CTNSO60931 367 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 GABARAPO95166 117 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 DBIP07108 87 aaKnown RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 ADRA2AP08913 450 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CCNA2P20248 432 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 PSMB9P28065 219 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CSF2RBP32927 897 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 TGFBR2P37173 567 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 PPM1FP49593 454 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 OR1D5P58170 312 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 SNRPGP62308 76 aaKnown RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 PSG6Q00889 435 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CFHR1Q03591 330 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 ST3GAL3Q11203 375 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 COX10Q12887 443 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 ERV3-1Q14264 604 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 NR1D2Q14995 579 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 LARS2Q15031 903 aaKnown RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 TCTE1Q5JU00 501 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 WDR45BQ5MNZ6 344 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 FIGNL1Q6PIW4 674 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 PTCHD4Q6ZW05 846 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 PRICKLE2Q7Z3G6 844 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 GDF7Q7Z4P5 450 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 ZAR1Q86SH2 424 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 MEX3DQ86XN8 651 aaKnown RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 NKAIN4Q8IVV8 208 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 UBALD2Q8IYN6 164 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 METTL27Q8N6F8 245 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 IQCF1Q8N6M8 205 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 GPR151Q8TDV0 419 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 FCGR1BQ92637 280 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 MYDGFQ969H8 173 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 SLC41A3Q96GZ6 507 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CACYBPQ9HB71 228 aaKnown RBP10.7□□□□□ -0.7
RAB5C-208ENST00000551338 SLC25A19Q9HC21 320 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 POLE3Q9NRF9 147 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 CLN6Q9NWW5 311 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 GPR83Q9NYM4 423 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 LRIT1Q9P2V4 623 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 KLHL3Q9UH77 587 aa10.7□□□□□ -0.7
RAB5C-208ENST00000551338 MRPS33Q9Y291 106 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms