RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 LIX1Q8N485 282 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 FAM83FQ8NEG4 500 aaPredicted RBP13.96□□□□□ -0.17
SSH1-204ENST00000546697 RND1Q92730 232 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 GFM2Q969S9 779 aaKnown RBP13.96□□□□□ -0.17
SSH1-204ENST00000546697 MS4A4EQ96PG1 132 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 SPOCK3Q9BQ16 436 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 BHLHE41Q9C0J9 482 aaPredicted RBP13.96□□□□□ -0.17
SSH1-204ENST00000546697 ZNF395Q9H8N7 513 aaPredicted RBP13.96□□□□□ -0.17
SSH1-204ENST00000546697 C3orf14Q9HBI5 128 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 TMBIM4Q9HC24 238 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 HHATLQ9HCP6 504 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 GALNT9Q9HCQ5 603 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 ATAD3AQ9NVI7 634 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 NOP53Q9NZM5 478 aaKnown RBP13.96□□□□□ -0.17
SSH1-204ENST00000546697 GIMAP2Q9UG22 337 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 MRTO4Q9UKD2 239 aaKnown RBP13.96□□□□□ -0.17
SSH1-204ENST00000546697 ACAD8Q9UKU7 415 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 RNF6Q9Y252 685 aa13.96□□□□□ -0.17
SSH1-204ENST00000546697 ANKRD28O15084 1053 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 EMC8O43402 210 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 AKAP10O43572 662 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 SKAP2O75563 359 aaPredicted RBP13.95□□□□□ -0.18
SSH1-204ENST00000546697 EPPINO95925 133 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 FREM3P0C091 2139 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 LAMP1P11279 417 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 IL12BP29460 328 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 CEACAM8P31997 349 aaPredicted RBP13.95□□□□□ -0.18
SSH1-204ENST00000546697 EVI2BP34910 448 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 TIMP3P35625 211 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 KRT20P35900 424 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 PSMD4P55036 377 aaKnown RBP13.95□□□□□ -0.18
SSH1-204ENST00000546697 DIO3P55073 304 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 BST1Q10588 318 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 ZNHIT3Q15649 155 aaPredicted RBP13.95□□□□□ -0.18
SSH1-204ENST00000546697 C1orf185Q5T7R7 199 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 ANKRD26P1Q6NSI1 321 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 MFSD12Q6NUT3 480 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 SEM1Q6ZVN7 128 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 OR8J2Q8NGG1 315 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 CLHC1Q8NHS4 586 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 AGR3Q8TD06 166 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 OR5P2Q8WZ92 322 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 FAM120BQ96EK7 910 aaKnown RBP13.95□□□□□ -0.18
SSH1-204ENST00000546697 JSRP1Q96MG2 331 aaPredicted RBP13.95□□□□□ -0.18
SSH1-204ENST00000546697 STACQ99469 402 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 MEAF6Q9HAF1 191 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 NEUROD4Q9HD90 331 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 DUSP22Q9NRW4 184 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 KLRF1Q9NZS2 232 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 SH3BP4Q9P0V3 963 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 OR10H1Q9Y4A9 318 aa13.95□□□□□ -0.18
SSH1-204ENST00000546697 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 KLF11O14901 512 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 SCN2BO60939 215 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 TOXO94900 526 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 G6PDP11413 515 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 BMP7P18075 431 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 BGNP21810 368 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 CHMP24386 653 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 PRR5P85299 388 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 PMPCAQ10713 525 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 HSPB3Q12988 150 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 STX3Q13277 289 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 GANABQ14697 944 aaKnown RBP13.94□□□□□ -0.18
SSH1-204ENST00000546697 SF3B4Q15427 424 aaKnown RBP eCLIP13.94□□□□□ -0.18
SSH1-204ENST00000546697 ACSF3Q4G176 576 aaPredicted RBP13.94□□□□□ -0.18
SSH1-204ENST00000546697 NSUN5P2Q63ZY6 315 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 NUP43Q8NFH3 380 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 OR7A2PQ8NGA2 310 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 OR5M9Q8NGP3 310 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 PPP1R14CQ8TAE6 165 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 ZPLD1Q8TCW7 415 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 SFXN5Q8TD22 340 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 TESCQ96BS2 214 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 EFHD2Q96C19 240 aaPredicted RBP13.94□□□□□ -0.18
SSH1-204ENST00000546697 SDCCAG3Q96C92 435 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 WDYHV1Q96HA8 205 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 PRPF18Q99633 342 aaKnown RBP13.94□□□□□ -0.18
SSH1-204ENST00000546697 UGT2B28Q9BY64 529 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 AKTIPQ9H8T0 292 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
SSH1-204ENST00000546697 ARHGAP21Q5T5U3 1957 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 PDZD2O15018 2839 aa13.94□□□□□ -0.18
SSH1-204ENST00000546697 PKDREJQ9NTG1 2253 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 A0A1W2PRB8 838 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 MBD3L4A6NDZ8 208 aaPredicted RBP13.93□□□□□ -0.18
SSH1-204ENST00000546697 MBD3L3A6NE82 208 aaPredicted RBP13.93□□□□□ -0.18
SSH1-204ENST00000546697 MBD3L5A6NJ08 208 aaPredicted RBP13.93□□□□□ -0.18
SSH1-204ENST00000546697 ALG1L2C9J202 215 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 GNB5O14775 395 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 ZIC3O60481 467 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 IGKV1D-16P01601 117 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 ADH7P40394 386 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 KIR3DL1P43629 444 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
SSH1-204ENST00000546697 GLYR1Q49A26 553 aaPredicted RBP13.93□□□□□ -0.18
SSH1-204ENST00000546697 EIPR1Q53HC9 387 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms