RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 CSTF3Q12996 717 aaKnown RBP7.67□□□□□ -1.18
USP28-215ENST00000545608 RASA2Q15283 850 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 POU4F3Q15319 338 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 DEFB113Q30KQ7 82 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 FBXW10Q5XX13 1052 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 SCIMPQ6UWF3 145 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 TIFABQ6ZNK6 161 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 GPRIN3Q6ZVF9 776 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 CAMKMTQ7Z624 323 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 LUZP2Q86TE4 346 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 IFNEQ86WN2 208 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 GCNT2Q8N0V5 402 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 OR7G2Q8NG99 324 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 OR4N2Q8NGD1 307 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 METTL6Q8TCB7 284 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 C16orf78Q8WTQ4 265 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 RNF138Q8WVD3 245 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 C11orf24Q96F05 449 aaPredicted RBP7.67□□□□□ -1.18
USP28-215ENST00000545608 C16orf45Q96MC5 204 aaPredicted RBP7.67□□□□□ -1.18
USP28-215ENST00000545608 VSTM2LQ96N03 204 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 SFXN2Q96NB2 322 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 BTBD9Q96Q07 612 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 ALPK1Q96QP1 1244 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 ZNF382Q96SR6 550 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 SFXN3Q9BWM7 321 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 FOLH1BQ9HBA9 442 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 SLC35C2Q9NQQ7 365 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 DLL4Q9NR61 685 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 ARGLU1Q9NWB6 273 aaPredicted RBP7.67□□□□□ -1.18
USP28-215ENST00000545608 GALNT8Q9NY28 637 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 CLCF1Q9UBD9 225 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 EDARQ9UNE0 448 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 RPH3AQ9Y2J0 694 aaPredicted RBP7.67□□□□□ -1.18
USP28-215ENST00000545608 TIMM22Q9Y584 194 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 WIF1Q9Y5W5 379 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 ACANP16112 2415 aa7.67□□□□□ -1.18
USP28-215ENST00000545608 ITPR3Q14573 2671 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 EXOC1LA0A1B0GW35 172 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 GNG14A0A1W2PPG7 69 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 A8MXE2 369 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 HCRTR2O43614 444 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 TNFSF13O75888 250 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 TGM6O95932 706 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 GHRHP01286 108 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 RAF1P04049 648 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 HRGP04196 525 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 ZNF708P17019 499 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 ATP5F1P24539 256 aaPredicted RBP7.66□□□□□ -1.18
USP28-215ENST00000545608 GRK2P25098 689 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 DPP4P27487 766 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 TIA1P31483 386 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP28-215ENST00000545608 PNLIPRP2P54317 469 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 PRKAA2P54646 552 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 CLDN18P56856 261 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 B3GALT5-AS1P59052 145 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 ACSM2AQ08AH3 577 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 KEAP1Q14145 624 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 EFR3AQ14156 821 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 LGSNQ5TDP6 509 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 ACSM2BQ68CK6 577 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 AAGABQ6PD74 315 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 LARP4Q71RC2 724 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP28-215ENST00000545608 SLC44A2Q8IWA5 706 aaPredicted RBP7.66□□□□□ -1.18
USP28-215ENST00000545608 GBP7Q8N8V2 638 aaPredicted RBP7.66□□□□□ -1.18
USP28-215ENST00000545608 WFDC11Q8NEX6 87 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 EFHD2Q96C19 240 aaPredicted RBP7.66□□□□□ -1.18
USP28-215ENST00000545608 ERP27Q96DN0 273 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 MTBPQ96DY7 904 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 ZFP3Q96NJ6 502 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 DACH2Q96NX9 599 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 KCNA7Q96RP8 456 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 YIPF4Q9BSR8 244 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 EBPLQ9BY08 206 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 BHLHE41Q9C0J9 482 aaPredicted RBP7.66□□□□□ -1.18
USP28-215ENST00000545608 DSN1Q9H410 356 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 FLRT3Q9NZU0 649 aa7.66□□□□□ -1.18
USP28-215ENST00000545608 MRPS18CQ9Y3D5 142 aaKnown RBP7.66□□□□□ -1.18
USP28-215ENST00000545608 CELSR1Q9NYQ6 3014 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 A0A096LPE4 126 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 A0A1W2PNV4 684 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 SH3D21A4FU49 640 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 MYO1GB0I1T2 1018 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 GOLGA8RI6L899 631 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 UBFD1O14562 309 aaKnown RBP7.65□□□□□ -1.18
USP28-215ENST00000545608 SCO2O43819 266 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 PLOD3O60568 738 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 ABHD2P08910 425 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 ANXA4P09525 319 aaPredicted RBP7.65□□□□□ -1.18
USP28-215ENST00000545608 CD53P19397 219 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 CHMP24386 653 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 IL12BP29460 328 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 MPIP34949 423 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 KRT20P35900 424 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 CPA2P48052 419 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 FOXA1P55317 472 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 CLDN15P56746 228 aa7.65□□□□□ -1.18
USP28-215ENST00000545608 PSG6Q00889 435 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms