RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TGM5O43548 720 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 PAHP00439 452 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 HLA-DQB1P01920 261 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 POU3F2P20265 443 aaPredicted RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 APEX1P27695 318 aaKnown RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 TALDO1P37837 337 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 NSG1P42857 185 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 ELOAQ14241 798 aaKnown RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 TNFAIP8L2Q6P589 184 aaPredicted RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 GPR65Q8IYL9 337 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 IZUMO1Q8IYV9 350 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 TMEM156Q8N614 296 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 NANOGP1Q8N7R0 232 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 ZNF680Q8NEM1 530 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 GEMIN6Q8WXD5 167 aaKnown RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 WBP2Q969T9 261 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 UPRTQ96BW1 309 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 ZBED6CLQ96FA7 236 aaPredicted RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 KCTD7Q96MP8 289 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 GAL3ST1Q99999 423 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 CRISPLD2Q9H0B8 497 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 CHST8Q9H2A9 424 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 SERHL2Q9H4I8 314 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 SLC25A19Q9HC21 320 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 IL17CQ9P0M4 197 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 SEC14L3Q9UDX4 400 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 RPL36Q9Y3U8 105 aaKnown RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 RBM7Q9Y580 266 aaKnown RBP4.94□□□□□ -1.62
PROM1-220ENST00000540805 HRH3Q9Y5N1 445 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 PRSS21Q9Y6M0 314 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
PROM1-220ENST00000540805 WDFY3Q8IZQ1 3526 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 CADP27708 2225 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 KCNE1BA0A087WTH5 132 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GLOD5A6NK44 160 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NPIPB8E9PQR5 432 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LEFTY1O75610 366 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 RGS11O94810 467 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 HBQ1P09105 142 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LAMP1P11279 417 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SRCP12931 536 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 MYOGP15173 224 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 HMGA1P17096 107 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 PTNP21246 168 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 HNF1BP35680 557 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PER3P56645 1201 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 MEF2AQ02078 507 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 RPA4Q13156 261 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 IL18Q14116 193 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GANABQ14697 944 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 SF3A2Q15428 464 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 SGCBQ16585 318 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NDUFA9Q16795 377 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LYPLAL1Q5VWZ2 237 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TRILQ7L0X0 811 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NPAS3Q8IXF0 933 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PROKR2Q8NFJ6 384 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 NEK7Q8TDX7 302 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ADAMTS19Q8TE59 1207 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 WNT2BQ93097 391 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TSSK6Q9BXA6 273 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ESRP2Q9H6T0 727 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 IFT22Q9H7X7 185 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 LIN7BQ9HAP6 207 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 BEX1Q9HBH7 125 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 KCMF1Q9P0J7 381 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 COMMD3Q9UBI1 195 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 IL36AQ9UHA7 158 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TAC3Q9UHF0 121 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ELF5Q9UKW6 265 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 ING4Q9UNL4 249 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PCDHGB7Q9Y5F8 929 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 COL4A3Q01955 1670 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 PLXNB3Q9ULL4 1909 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TRAV6A0A075B6T7 132 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 A0A1W2PQU0 124 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 UPK3BL1B0FP48 263 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 UPK3BL2E5RIL1 263 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TO15178 435 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ERI3O43414 337 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 GCM2O75603 506 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 MPC2O95563 127 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 CD160O95971 181 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 KLK3P07288 261 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 SELLP14151 372 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SLC6A4P31645 630 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SGSHP51688 502 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SNRPGP62308 76 aaKnown RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZNF91Q05481 1191 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GAB1Q13480 694 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 SCARB2Q14108 478 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 COL19A1Q14993 1142 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZNF628Q5EBL2 1059 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 EOGTQ5NDL2 527 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 GCNT6Q5T4J0 391 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 FRG2Q64ET8 278 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 ZNF57Q68EA5 555 aaPredicted RBP4.93□□□□□ -1.62
PROM1-220ENST00000540805 CNIH2Q6PI25 160 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 TTLL10Q6ZVT0 673 aa4.93□□□□□ -1.62
PROM1-220ENST00000540805 USP30Q70CQ3 517 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms