RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 VSTM2LQ96N03 204 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 MRPL57Q9BQC6 102 aaKnown RBP11.25□□□□□ -0.61
COPS7A-211ENST00000540408 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
COPS7A-211ENST00000540408 KCNF1Q9H3M0 494 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 ANKRA2Q9H9E1 313 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 MED11Q9P086 117 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 XPR1Q9UBH6 696 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 HEY2Q9UBP5 337 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 MRTO4Q9UKD2 239 aaKnown RBP11.25□□□□□ -0.61
COPS7A-211ENST00000540408 EMC9Q9Y3B6 208 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF337Q9Y3M9 751 aa11.25□□□□□ -0.61
COPS7A-211ENST00000540408 ARID1AO14497 2285 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 H3BML4 177 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 PLOD3O60568 738 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 COQ9O75208 318 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 PLGP00747 810 aaPredicted RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 INHBAP08476 426 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 IL3P08700 152 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 SUCLG1P53597 346 aaKnown RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 PSMD4P55036 377 aaKnown RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 CDH13P55290 713 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF155Q12901 538 aaPredicted RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 DECR1Q16698 335 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 EXOC3L2Q2M3D2 409 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 GLYR1Q49A26 553 aaPredicted RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 CYP27C1Q4G0S4 372 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 PPP4R4Q6NUP7 873 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 LETMD1Q6P1Q0 360 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 ZDHHC24Q6UX98 284 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 FAM9CQ8IZT9 166 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 FADS6Q8N9I5 356 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 OR2M3Q8NG83 312 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 PPP1R14CQ8TAE6 165 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 FNDC9Q8TBE3 224 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 RNF138Q8WVD3 245 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 BBS4Q96RK4 519 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 SHCBP1LQ9BZQ2 653 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 MRPL46Q9H2W6 279 aaKnown RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 SLC35C2Q9NQQ7 365 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 ABCG2Q9UNQ0 655 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 AP4B1Q9Y6B7 739 aa11.24□□□□□ -0.61
COPS7A-211ENST00000540408 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
COPS7A-211ENST00000540408 HIVEP2P31629 2446 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 H0YC42 278 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 PCDH7O60245 1069 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ULK1O75385 1050 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 NME6O75414 186 aaPredicted RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 OR4F21O95013 312 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 RPS17P08708 135 aaKnown RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 PAX1P15863 534 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 TSPAN8P19075 237 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 HMOX2P30519 316 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 CCKARP32238 428 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 GSTM5P46439 218 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 SERPINB9P50453 376 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 TPD52P55327 224 aaPredicted RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ATP5J2P56134 94 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 CTBP2P56545 445 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 CLDN15P56746 228 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ACSM2AQ08AH3 577 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 CSTF3Q12996 717 aaKnown RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 STX5Q13190 355 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 RASA2Q15283 850 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ZNHIT3Q15649 155 aaPredicted RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 SPIN4Q56A73 249 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ACSM2BQ68CK6 577 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 NPSR1Q6W5P4 371 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 SH2D5Q6ZV89 423 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 RPS27LQ71UM5 84 aaKnown RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 STK32CQ86UX6 486 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 OR4N2Q8NGD1 307 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF483Q8TF39 744 aaPredicted RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 DUSP19Q8WTR2 217 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 MARK4Q96L34 752 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 HBEGFQ99075 208 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 ACSS3Q9H6R3 686 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 HHATLQ9HCP6 504 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 PAQR5Q9NXK6 330 aaPredicted RBP11.23□□□□□ -0.61
COPS7A-211ENST00000540408 DSCAMO60469 2012 aa11.23□□□□□ -0.61
COPS7A-211ENST00000540408 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.22□□□□□ -0.61
COPS7A-211ENST00000540408 OR2M5A3KFT3 312 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 CCDC151A5D8V7 595 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 MANBAO00462 879 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 PPP6CO00743 305 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 FADS1O60427 444 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 SUPT7LO94864 414 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 SLITRK5O94991 958 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 TAC1P20366 129 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 CLDN20P56880 219 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 PSG6Q00889 435 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 CLCQ05315 142 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 C17orf67Q0P5P2 114 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 TRADDQ15628 312 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 TEX35Q5T0J7 233 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF704Q6ZNC4 412 aaPredicted RBP11.22□□□□□ -0.61
COPS7A-211ENST00000540408 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 METTL25Q8N6Q8 603 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms