RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TSGA13Q96PP4 275 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 HHIPQ96QV1 700 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 FCRL5Q96RD9 977 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF382Q96SR6 550 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 FSD1LQ9BXM9 530 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 NSUN3Q9H649 340 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 FZD3Q9NPG1 666 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 AKAP7Q9P0M2 348 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 PLXNA4Q9HCM2 1894 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 FZD7O75084 574 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ICOSLGO75144 302 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 GATBO75879 557 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 C8AP07357 584 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 HMBSP08397 361 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 HOXB9P17482 250 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 PCP4P48539 62 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ARSDP51689 593 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 RAG2P55895 527 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TAS2R60P59551 318 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 DCDP81605 110 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 FABP5Q01469 135 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 MLLT1Q03111 559 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SMCO1Q147U7 214 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 RAB30Q15771 203 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC36A2Q495M3 483 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 LRRN1Q6UXK5 716 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 GSG1LQ6UXU4 331 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 Q6ZTK2 550 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 NUDT18Q6ZVK8 323 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 PGAP1Q75T13 922 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 GTPBP3Q969Y2 492 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TCEAL4Q96EI5 215 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ARL6Q9H0F7 186 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ENKD1Q9H0I2 346 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ZFP57Q9NU63 452 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 PIGVQ9NUD9 493 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 DDIT4Q9NX09 232 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TREM2Q9NZC2 230 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 NTMQ9P121 344 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SF3B6Q9Y3B4 125 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 RAI2Q9Y5P3 530 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SZT2Q5T011 3432 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 ZAR1LA6NP61 321 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 TRANK1O15050 2925 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 GALR3O60755 368 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 COX5BP10606 129 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC6A4P31645 630 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 GKP32189 559 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SUOXP51687 545 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DGKEP52429 567 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 RAB5BP61020 215 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SIM1P81133 766 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF155Q12901 538 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 ILKQ13418 452 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 HTR4Q13639 388 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 ZRANB3Q5FWF4 1079 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 ATAT1Q5SQI0 421 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 BTN2A1Q7KYR7 527 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SERPINA11Q86U17 422 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC9B2Q86UD5 537 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 TAC4Q86UU9 113 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 GPR135Q8IZ08 494 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SPAG16Q8N0X2 631 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC43A2Q8N370 569 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 OR10K1Q8NGX5 313 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 AKR7LQ8NHP1 331 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 RPLP0P6Q8NHW5 317 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 THAP6Q8TBB0 222 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 KAT2AQ92830 837 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 FTSJ1Q9UET6 329 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 FBXW11Q9UKB1 542 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 NEU3Q9UQ49 428 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CA5BQ9Y2D0 317 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 A0A1B0GVC2 190 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 A0A1B0GW55 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 NPEPPSL1A6NEC2 478 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 A6NIN4 97 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 STK25O00506 426 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 RAD1O60671 282 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 PRAMEF2O60811 474 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 KCNK5O95279 499 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 PAK4O96013 591 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SOD1P00441 154 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 NUDT7P0C024 238 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4L2P0CJ85 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4L3P0CJ86 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4L4P0CJ87 422 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4L5P0CJ88 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4L6P0CJ89 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4L7P0CJ90 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CD96P40200 585 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 EPHB3P54753 998 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 GEMP55040 296 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CDH12P55289 794 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 ACY1Q03154 408 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 TMEM255AQ5JRV8 349 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 MANEAQ5SRI9 462 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CYB5R2Q6BCY4 276 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms