RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 MUL1Q969V5 352 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SLC6A17Q9H1V8 727 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FZD3Q9NPG1 666 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 TM7SF3Q9NS93 570 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 PCDHGB7Q9Y5F8 929 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 WWP2O00308 870 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ITGA10O75578 1167 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CDC123O75794 336 aaPredicted RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SOD1P00441 154 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ADAP00813 363 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ERP29P30040 261 aaKnown RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 AKT2P31751 481 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 PSMA6P60900 246 aaKnown RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ZXDCQ2QGD7 858 aaPredicted RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 AGAP6Q5VW22 663 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 PLBD1Q6P4A8 553 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ATCAYQ86WG3 371 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CCDC36Q8IYA8 594 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 RPLP0P6Q8NHW5 317 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 DEDD2Q8WXF8 326 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 AGAP4Q96P64 663 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SERGEFQ9UGK8 458 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FBXL3Q9UKT7 428 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CCL27Q9Y4X3 112 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ATG2BQ96BY7 2078 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 C17orf113A0A1B0GUU1 675 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 PCDHGA12O60330 932 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 B3GALT4O96024 378 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 PTHP01270 115 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 ANXA3P12429 323 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 ADH7P40394 386 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 MAP3K8P41279 467 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 DLX2Q07687 328 aaPredicted RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 GRSF1Q12849 480 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 IRF4Q15306 451 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CNIH2Q6PI25 160 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CBLL1Q75N03 491 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 NUP43Q8NFH3 380 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 OR56A3Q8NH54 315 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CCDC32Q9BV29 185 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 LGR4Q9BXB1 951 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 AMBRA1Q9C0C7 1298 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 FAM227AF5H4B4 570 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 NARSO43776 548 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 JRKO75564 520 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 GRPRP30550 384 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 DRD3P35462 400 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 HSD17B2P37059 387 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 YBX1P67809 324 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 SWI5Q1ZZU3 235 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 MLIPQ5VWP3 458 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 ADAMTSL4Q6UY14 1074 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 FAM83HQ6ZRV2 1179 aaPredicted RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 NLRP8Q86W28 1048 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 NRMQ8IXM6 262 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CADM3Q8N126 398 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 JAGN1Q8N5M9 183 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CELF2-AS1Q8N7Q2 184 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 GATSQ8NAP1 163 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 OR4K3Q96R72 315 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 DPH7Q9BTV6 452 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 RNF121Q9H920 327 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 MBNL1Q9NR56 388 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 MLXQ9UH92 298 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 SH3D21A4FU49 640 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 GRXCR2A6NFK2 248 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 PDCD5O14737 125 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 SEC14L2O76054 403 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 TGFBR1P36897 503 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 MRPL19P49406 292 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CLK3P49761 638 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 CXCR4P61073 352 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 OR2G6Q5TZ20 316 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 AGBL4Q5VU57 503 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 C8orf82Q6P1X6 216 aaPredicted RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 FIGNL1Q6PIW4 674 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 DLEU7Q6UYE1 221 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 PDZD3Q86UT5 571 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 PAQR7Q86WK9 346 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF547Q8IVP9 402 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 SLC17A9Q9BYT1 436 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 TRIM2Q9C040 744 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 LYARQ9NX58 379 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 HCN3Q9P1Z3 774 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 BTNL2Q9UIR0 455 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 FARSAQ9Y285 508 aaKnown RBP9.41□□□□□ -0.9
TRAF1-202ENST00000540010 PIAS3Q9Y6X2 628 aa9.41□□□□□ -0.9
TRAF1-202ENST00000540010 FAM183AA6NL82 134 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ANKRD28O15084 1053 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 NPC1O15118 1278 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 LYRM1O43325 122 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 GPR37L1O60883 481 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PIM1P11309 404 aaPredicted RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF24P17028 368 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ADARB1P78563 741 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms